Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03495 ATGTCCGAGAATTTGTTACAATTTGTGAGATGGCTTGTAATTTCAACAACACTGATGCAGAGTAATGTAATTTGTGGAAGAGAAAGCAATTTCAGAGCAATTTTCAACTTCGGAGACTCCAATTCTGACACCGGCGGTCTCTCGGCGGCGTTCGGACAAGCTCCTCCTCCCAACGGAATCACGTTTTTCCACTCTCCAAAAGGACGATTCTCCGATGGCCGCCTCATAATCGATTTTATAGCGAAGAGCTTGGGCTTGCCTTATCTCAGTGCTTACTTGGACTCGGTGGGGTCCAATTTCAGCCACGGAGCGAACTTCGCCACCGCGGGATCCACCGTCAGACCTCAGAACACAACTAAGTCTCAGAGCGGATACAGTCCCATTTCCCTAGATGTGCAGTTTGTGCAATTCTCCGATTTCAAAACCAGATCCAAATTGGTTCGCCAACAAGGAGGGGTGTTTAAGGAGTTATTGCCCAAGGAGGAGTATTTTTCTGAGGCTCTATATACCTTTGATATTGGCCAAAATGATATCACAGCTGGCTACAAACTCAACTTGACCACAGAACAAGTCAAGGCCTATATTCCTGATGTATTGGGCCAGTTCACCAGAGTTATAAAGGGTGTGTATGAGGAAGGTGGGAGGTCGTTTTGGATACACAACACAGGCCCGTTGGGATGCTTGCCATACATGCTGGATCGCTATCCCATGAGCCCAGCCCAAATGGACGAGTTTGGATGTGCCAAACCATTCAATGAGGTGGCCCAATATTTTAATAAAAGATTAAAAGAAACTGTTGGGAAACTGAGGGAAGAATTGCCAGAGGCTAAAATCACCTATGTTGATGTGTATAGGGTGAAGTACACCCTCATCAGCCATGCTAAAAAATATGGTTTTGAGAAGGGGGTGATAGCATGCTGTGGACATGGTGGGAAATACAACTTCAATAATAGAGAGAGATGTGGAGCAAGCAAGAGAAAGAATGGGAGAGAGGTTGTGATAGCCAAATCTTGCAAAGATCCAAGTGTGAGGATCATTTGGGATGGAATCCATTACACCGAAGCTGCTAATAATTGGATCTTTCTGCAGATAGTCAATGGCTCATTTTCAGATCCACCAACATCATTAGGAGTTACAAATTCACGTTCTTGGAAGACTGAATTTTGA 1167 0.4473 MSENLLQFVRWLVISTTLMQSNVICGRESNFRAIFNFGDSNSDTGGLSAAFGQAPPPNGITFFHSPKGRFSDGRLIIDFIAKSLGLPYLSAYLDSVGSNFSHGANFATAGSTVRPQNTTKSQSGYSPISLDVQFVQFSDFKTRSKLVRQQGGVFKELLPKEEYFSEALYTFDIGQNDITAGYKLNLTTEQVKAYIPDVLGQFTRVIKGVYEEGGRSFWIHNTGPLGCLPYMLDRYPMSPAQMDEFGCAKPFNEVAQYFNKRLKETVGKLREELPEAKITYVDVYRVKYTLISHAKKYGFEKGVIACCGHGGKYNFNNRERCGASKRKNGREVVIAKSCKDPSVRIIWDGIHYTEAANNWIFLQIVNGSFSDPPTSLGVTNSRSWKTEF 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03495 388 Coils Coil 259 279 - -
Vian1g03495 388 Gene3D SGNH hydrolase 22 368 IPR036514 -
Vian1g03495 388 CDD SGNH_plant_lipase_like 33 368 IPR035669 -
Vian1g03495 388 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 22 373 - -
Vian1g03495 388 Pfam GDSL-like Lipase/Acylhydrolase 34 361 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03495 Vian-Chr1 57505137 57507514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03495 33 376 Acyl Lipid Metabolism Gene Families AT4G10950 30.362 1.08e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03495 - - var:108335696 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03495 1 57505137 57507514 Vian1g03495 1 57505137 57507514 ECH