Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03484 ATGTCTCGTCCAGAAAAAAACCCTCATTTTTCTCGACCATCACAGCCTGAATTCGTGATAGATGATGATAGAGATAAACCACATATTTCACATGGGCCACGCCAAAAACGTCGTGCCCAACCACCCCCTCAGGTAATAGCTGCACCTATACCTCAGAACGAAGAACGTGTTCCATTACGACCACCACCTCAACACGAAGACCATCTTCAATCACAAGATCACCCACCTATTTCGCAAGGACCACGCTCAAAAAGAAGTCCAAGTAAATATCCAACAAATCAAGGTTTGCGACCAGTTAAGTCCTCAAAGGTAAATTTCCAAGAGCCACCTCCCTCTGCCGAAGCCCCTCCACCGCTGCCACCCTCCGACAATCCTCCGCTGCCACGCCGTAAGCCCCTCAGTGATCTCCGCCACACCGGTATAAAGTTGCCGGAGGAGCAAAAGTCTCCACCTTTGACATGGTTAGGTGCGTGCTTGTGTGTGATATTTTGGCTCATCATAATCATAGGAGGGTTGATAGTGCTTATAGTGTACTTTGTTTTTCGGCCACAAAGTCCTCATTTTGATGTGTCTAGTGTGACCTTAAATGCTGCATACCTTGACCTTGGATATCTGCTGAATGCTGATCTAACCATGCTGGCTAACTTCACAAACCCAAACAAGAAGGTGCATGTGGACTTCAGCTCTGTCATCATTTATCTCTACTATGGAAGCACCCTCATTGCCACACAGTATGTTGAACCTTTCTCTGCTGCAAGGCTTCAATCAAGGTTTGCAACGATCCACATGGTGTCTAGTCAGGTTCAGCTGCCATTGAGAGAAAGCCAGCGCCTTGTCAAACAGATGGAGGGCAATGGCGTGATTCTCGAAGTGAGGGGAATATTTCGTGCAAGATCAAAACTGGGAACCATTTTGAGGTATTCGTATAATCTCTATGGCCGTTGCAGCGTCATGCTAACACGTCCTCCTGATGGCATTATGCTCAAAAAGAAATGCAGAACGAAGCGCTGA 1011 0.4698 MSRPEKNPHFSRPSQPEFVIDDDRDKPHISHGPRQKRRAQPPPQVIAAPIPQNEERVPLRPPPQHEDHLQSQDHPPISQGPRSKRSPSKYPTNQGLRPVKSSKVNFQEPPPSAEAPPPLPPSDNPPLPRRKPLSDLRHTGIKLPEEQKSPPLTWLGACLCVIFWLIIIIGGLIVLIVYFVFRPQSPHFDVSSVTLNAAYLDLGYLLNADLTMLANFTNPNKKVHVDFSSVIIYLYYGSTLIATQYVEPFSAARLQSRFATIHMVSSQVQLPLRESQRLVKQMEGNGVILEVRGIFRARSKLGTILRYSYNLYGRCSVMLTRPPDGIMLKKKCRTKR 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03484 336 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 145 318 - -
Vian1g03484 336 MobiDBLite consensus disorder prediction 110 128 - -
Vian1g03484 336 MobiDBLite consensus disorder prediction 16 30 - -
Vian1g03484 336 MobiDBLite consensus disorder prediction 1 134 - -
Vian1g03484 336 MobiDBLite consensus disorder prediction 73 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03484 Vian-Chr1 57394736 57395746 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03484 - - var:108337628 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03484 1 57394736 57395746 Vian1g03484 1 57394736 57395746 ECH