Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03080 ATGAAGGAGGTTAGCTCATCTGGCATTGGAATGGCCACAAGGGAAGCTTATTCGCAAAGCCCCAAGAAGAAAGTTCCTCTCTTTCCTCTTCTCTCTCTTCTCTGCTTCACTTCCATCTTCCTCCTTCTCTCCCAATTCAGAACCACCTCCTCCCCTTCCATTGCCCATTCTCTTCCCACCTTCCACAAACACACCCAAGCTTCCTGCAATTTCTCCGACGGAAAATGGATCAGTCATCCTCCCAGAATTCCAACCTACGACCACACCTGCAAGGAGATCTTCAAGGGCTGGAACTGCCTCTCCGCCAACAAATCCAACGCCCCTCTTCTCCCCACCTGGCGCTGGCAGCCCCGCCACTGCGATCTCCCCCAATTCCATCCCCTTAACTTCCTCCGCGCTCACACTCACACCGCCATTGGGTTTGTCGGGGACTCGCTCAACAGGAACATGTTTGTGTCTCTCTTCTGCTCTCTCAAGAGTGCCTCCGAGGGACAAGTCAAGAAGTGGCGCCCCGCTGGGGCTGACCGTGGATTCACCTTCCTCGCTTACAATCTCACCATCGCCTATCACCGTACCAATCTTCTCGCTCGTTATGGTAGCTGGTCCGCTAGTGATAAAGGTGGTGCCTTAGAAACTCTTGGATTCAAAGAGGGATATAGAGTTGATGTTGATGTTCCAGACAGCACGTGGGCAAAGGCTCTGAGTTTCCACGATATTTTAATTTTTAACACGGGACACTGGTGGTGGGCCCCTTCAAAATTTGACCCTGTTAAGTTCCCCATGCTTTTCTTCAAGAATGACCAGCCGGTAATCCCTCCAATACGTCCAGATCAAGGCCTGGATATGGTTTTGGAGCACATGATAAAGTATGTGGAGAAAAATGCACGGCCTGGTGCAGTAAAATTTTTTCGTACTCAATCACCCAGACACTTTGAAGGAGGAGATTGGGATCAGGGTGGTTCCTGTCTAAGGGATGGACCTTTGTCGATAGAGCAGGTAGAAGAACTTTTCTCCGTGAAGAATAATGGGACAAATGTGGAGACTCGGCTTGTGAATGATCACCTCTATAAGGCTCTCGAGGGGTCTGATTTCATTATTTTGGACATCACTCACATGAGTGAGTTCAGGGCTGATGCACACCCTGCTTCAGCTGGAGGGAAAAAACATGATGATTGCATGCACTGGTGCTTACCTGGAATTACAGATACCTGGAATGATTTGTTCATAGAGCTTCTGAATAGTAAGAAGTATCAAGCGTAG 1260 0.4913 MKEVSSSGIGMATREAYSQSPKKKVPLFPLLSLLCFTSIFLLLSQFRTTSSPSIAHSLPTFHKHTQASCNFSDGKWISHPPRIPTYDHTCKEIFKGWNCLSANKSNAPLLPTWRWQPRHCDLPQFHPLNFLRAHTHTAIGFVGDSLNRNMFVSLFCSLKSASEGQVKKWRPAGADRGFTFLAYNLTIAYHRTNLLARYGSWSASDKGGALETLGFKEGYRVDVDVPDSTWAKALSFHDILIFNTGHWWWAPSKFDPVKFPMLFFKNDQPVIPPIRPDQGLDMVLEHMIKYVEKNARPGAVKFFRTQSPRHFEGGDWDQGGSCLRDGPLSIEQVEELFSVKNNGTNVETRLVNDHLYKALEGSDFIILDITHMSEFRADAHPASAGGKKHDDCMHWCLPGITDTWNDLFIELLNSKKYQA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03080 419 Pfam PMR5 N terminal Domain 68 121 IPR025846 -
Vian1g03080 419 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 44 408 IPR029962 GO:0016413
Vian1g03080 419 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 122 410 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03080 Vian-Chr1 51361904 51364977 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03080 - - vun:114178550 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03080 1 51361904 51364977 Vian1g03080 1 51361904 51364977 ECH