Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03077 ATGGAAGATTACAATTTTTTTGTTGGTCAAGAGTTCCCAGATGTGAAGGCATTCCGGAATGCAATTAAAGAAGCTGCCATTGCACAGCATTTTGAGCTTCGTACTATTAAAAGTGACCTGATTCGCTACTTTGCCAAGTGTGCCTCAGATGGTTGTCCATGGCGGATTCGTGCTGTCAAGCTCCCTAATGCCCCAACTTTTACTATTAGAAGTATTGATGGCACACATACTTGTGGGAGGAATGCAAACAATGGGCACCATCAGGCTTCTGTTGACTGGATTGTGAGTTTCATTGAAGAAAGATTGCGAGACAATATTAATTATAAACCAAAGGATATTTTACATGACATCCATAAACAATATGGTATAACTATACCTTATAAGCAAGCTTGGCGTGCAAAGGAGCGGGGTCTTGCAGCTATATATGGATCTTCTGAAGAAGGATATTACCTACTTCCTTCTTACTGTGAAGAAATTAAGAAAACAAATCCTGGAAGTGTTGCAGAGGTGTTTACCGCTGGTGAAGATAACCGTTTTCAGAGACTTTTTGTTTGCTTTCGTGCATCAATCTATGGTTTTTTTAATGGTTGCTTGCCAATTGTTGGACTTGGCGGAATCCAGCTGAAAAGCAAATACCTTAGCACATTGCTTTCAGCAACTTCTTTTGATGCTGACGGTGGATTGTTTCCGCTTGCTTTTGGTGTTGTTGATGTAGAAAATGATGATAGCTGGACATGGTTCCTGTCTGAGTTGCATAGGGTTCTGGAGGGGAATACTGAATGCATGCCAGAATTTATATTTTTATCAGATGGGCAACAGGGTATTACGGATACAGTGAGAAGTAAGTTCCCAAGTTCTTCGCATGCATTCTGCATGCGTCACTTGGCTGAAAGCATTAGTAAAGAGTTCAAGAACTCTAGGCTTGTCCATCTTCTGTGGAAGGCTGCATATGCTACCACAACCATTGCATTTAAAGAAAAAATTGCTGAAATAGAGGAGGTATCTCCTGAAGCTGCTAAATGGTTACAACATTTTGATCCTTCTCAATGGGCCCTTGTGCATTTTAAAGGGACACGATTTGGCCATCTATCCTCTAACATTGACGAGTTCACCAAATGGATTCTTGATGCTCGAGAATTGCCAATTATCCAGGTGATGGAGCGGATTCATAGCAAGCTTAAAACTGAGTTTGATGACAGGCGGATAAAAAGCAGCTCATGGTGCTCTGTACTCGCCCCTTCTGCCGAGAAGCTAATGAATGAAGCCATCAACCGTGCATCTATATATCAAGTCCTTAGATCAGATGAAGTAGAATTTGAGGTTCTTTCAGCTGATCGATCTGACATTGTAAATATTGGCAGCTATAGTTGTTCCTGCCGCGATTGGCAGCTAAATGGTATTCCTTGTTCCCATGCTGCTGCTGCTCTTATCTCATGTGGGAAGGATGTCTATGCATTTACCCACAAGAGTTTTACTGTTTCAAGTTACAGGAATACCTATGCAGAGAGTATACACTACATCCCAGCAAAACTTGAATGGAGTAAAACAGACAAGTCTTCTATGGATGATAATATCCTAGTTGTACGGCCACCAAAATTACGGCGACCACCGGGACGCCCTGAAAAAAGGATGTGTCTGGATGAGGTTAGTCGTGAGAAACATACAGTGCACTGTAGTCGGTGCAACCAAACTGGACATTACAAGAGAACCTGTAAAGCAGAAATGATTAATAGTATAGAGCAGTTTTAA 1749 0.4151 MEDYNFFVGQEFPDVKAFRNAIKEAAIAQHFELRTIKSDLIRYFAKCASDGCPWRIRAVKLPNAPTFTIRSIDGTHTCGRNANNGHHQASVDWIVSFIEERLRDNINYKPKDILHDIHKQYGITIPYKQAWRAKERGLAAIYGSSEEGYYLLPSYCEEIKKTNPGSVAEVFTAGEDNRFQRLFVCFRASIYGFFNGCLPIVGLGGIQLKSKYLSTLLSATSFDADGGLFPLAFGVVDVENDDSWTWFLSELHRVLEGNTECMPEFIFLSDGQQGITDTVRSKFPSSSHAFCMRHLAESISKEFKNSRLVHLLWKAAYATTTIAFKEKIAEIEEVSPEAAKWLQHFDPSQWALVHFKGTRFGHLSSNIDEFTKWILDARELPIIQVMERIHSKLKTEFDDRRIKSSSWCSVLAPSAEKLMNEAINRASIYQVLRSDEVEFEVLSADRSDIVNIGSYSCSCRDWQLNGIPCSHAAAALISCGKDVYAFTHKSFTVSSYRNTYAESIHYIPAKLEWSKTDKSSMDDNILVVRPPKLRRPPGRPEKRMCLDEVSREKHTVHCSRCNQTGHYKRTCKAEMINSIEQF 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03077 582 PANTHER POLYPROTEIN, PUTATIVE-RELATED 10 542 - -
Vian1g03077 582 SMART 26again6 455 482 IPR006564 GO:0008270
Vian1g03077 582 ProSiteProfiles Zinc finger SWIM-type profile. 439 480 IPR007527 GO:0008270
Vian1g03077 582 Pfam SWIM zinc finger 446 479 IPR007527 GO:0008270
Vian1g03077 582 Pfam MuDR family transposase 6 69 IPR004332 -
Vian1g03077 582 Pfam MULE transposase domain 209 296 IPR018289 -
Vian1g03077 582 ProSiteProfiles Zinc finger CCHC-type profile. 558 572 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03077 Vian-Chr1 51282197 51283945 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03077 - - gmx:100800865 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03077 1 51282197 51283945 Vian1g03077 1 51282197 51283945 ECH