Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03000 ATGGAAGCTTCATCTAAATGCAGAAGGTACAGAAAGGGTGTTTCTGTGAATGGTTGCTATGCCTCCAAATATATCTCTAGTTCTCAGTCAAATGGGGAAGCAAAAGTTACTTGTAGATGTTGCAAAGAAGAGTGTCACTGCTTATTGCCCTCAAGAACAAACTTACCCTTTGGCAATTCAACTTTGGGATCACATAGTTCAAAGAAAGAATGTGGAATATGCTGTCCAGTGAAAAAAATTGGATCCAAATTGCTGAAACTTGGTAATTTAGGAGCTTCAAACAAAGATGAAAATTTGCTTAGTGGGTCATTATCTCATTCAATGCCCTCTTCCTCAGCCTTTTCTAGCACTAGCAGGTATAATAAACGAGCGGTTCTCTGTGGAGTTTCTTACAGAAGGAAATTCAGACTCAGAGGAATCATTAATGACATTACTAACATGAAGGAACTGCTGATCAAGAATTTTGACTTTCCAAATGAGTGCATACGAATCCTCACAGAACATGGGGAAAACGGCAATTTGATACCAACGAAACACAACATAATGGAATCCTTAAGGTGGCTTGTGAAGGACGCTGAGCCAGGAGACTCATTAGTGTTTTACTTCTCGGGACACGGTTCTCAGCAGCCAGATTTGAAAGAAGATGAAATTGATGGGTTTGATGAGACTCTTTGCCCTGTTGACTATTTGATAGAAGGAATGATCATTGACAATGAAATCAATTCCACCATAGTTTGGCCACTAAAGAAAGGTGTCACACTTCATGCTATTGTTGATGCATGTCATAGCGGCACAATTCTTGATCTTCTGTTTGTTTACAATCAAGAAAGTGGGATTTGGGAGGATAACAAGCCGCCATCAAAAGAACCTATAAGAAAACATTCAAGTGGTGGATTGGCGATTTGTCTTAGTGCTTGTGAAGATAACCAGACAGCTTGTGATAGCTCTGTTTTTGGTGGAAAGGGAATGAATGGTGTTCTGACTTATCTTTTCACAAAAGCAATCAGAGAATACCCTGGAATAACTTATGGGCGTCTCCTACAAAATATGCATGAAGAGATTAAGAAGATTAACAGAAGCAAATGCAATAACCGCATATTGCAACATATCTTCAATCGTAAAATTGCACAGGATCCTCTTCTATCATCATCGGAGAAATTTGATGTTTCTACGACAATGTTCTCCTTGTGA 1191 0.3904 MEASSKCRRYRKGVSVNGCYASKYISSSQSNGEAKVTCRCCKEECHCLLPSRTNLPFGNSTLGSHSSKKECGICCPVKKIGSKLLKLGNLGASNKDENLLSGSLSHSMPSSSAFSSTSRYNKRAVLCGVSYRRKFRLRGIINDITNMKELLIKNFDFPNECIRILTEHGENGNLIPTKHNIMESLRWLVKDAEPGDSLVFYFSGHGSQQPDLKEDEIDGFDETLCPVDYLIEGMIIDNEINSTIVWPLKKGVTLHAIVDACHSGTILDLLFVYNQESGIWEDNKPPSKEPIRKHSSGGLAICLSACEDNQTACDSSVFGGKGMNGVLTYLFTKAIREYPGITYGRLLQNMHEEIKKINRSKCNNRILQHIFNRKIAQDPLLSSSEKFDVSTTMFSL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03000 396 Pfam Caspase domain 122 385 IPR011600 GO:0004197|GO:0006508
Vian1g03000 396 Gene3D - 89 396 - -
Vian1g03000 396 PANTHER METACASPASE-4 120 390 - -
Vian1g03000 396 SUPERFAMILY Caspase-like 125 353 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03000 Vian-Chr1 49332283 49337827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03000 K22684 - gmx:100796640 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03000 1 49332283 49337827 Vian1g03000 1 49332283 49337827 ECH