Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02811 ATGTTGACTTCTGCATCTTCCTCCATCTTCTACTTCATCCCCACTCCAAAGCCCTCACATTCTTCTCGCTTCACCGTTCGGGCTCACTCCAAACCCCCCGCTCTCCCCAACCTCAAAGCCCTCGCTGGCGCCGCAGTCTTCGCCGCCGTCGCCCTCCAATTCCCCTCCGCACGCGCCTCTCCCCCTCCTTCGCCCCCTCTCCAAACCGACTACCGCCACGAAGAATCCCTCACGCCGCTCTCAGACATCCTCGAAACGAACGTCGAGGCCCTCGCCGCTCTCAAGTCCCTCCTCCAGCAGAAGCTCGAGCTCGGCGAGGACGACGAGGCGCGGGCCATCCTCAAGCGCCTAATCGCCGCGCAGCCCGACGTCGTCGACTGGAAGTTCCTCGCAGCGCGCCTCGCCGCCGAGACTGGCGACGCCGATGGTGCTCGCGCGTACTACGAGGAAGTTCTGGCGGCAAACCCGCTCTCGTTCGAGGCGCTGTTCGAGAACGCACTGCTGATGGACCGGTCAGGGGAAGGGGAGGCGGCTATGCGGCGGCTGGAGGAGGCGCTGCGCGTGGCCGAGGAGGACAACAAGAAGAAGGAGGCGAGGGACGTGAGGCTCATCATAGCTCAGATCATGTTTCTTCAGAAGAATGTGGATGAAGCGTTAGGGATTTATGATCAGCTCACGAAAGAGGATTCGAGTGATTTCAGACCTTACTTTTGCAGAGGCATGATTTATAGCTTGCTTGATAGAAACGAGGAGGCAAAGGAGCAGTTTGCAAAGTACAGAGAGTTGAGTCCCAAGAAATTTGAGGTGGATGGGTATTTGAGAACCCCTTTGTCAAGGATGAAGCTGTTTAGCACCGATGAGAGCTGA 867 0.5836 MLTSASSSIFYFIPTPKPSHSSRFTVRAHSKPPALPNLKALAGAAVFAAVALQFPSARASPPPSPPLQTDYRHEESLTPLSDILETNVEALAALKSLLQQKLELGEDDEARAILKRLIAAQPDVVDWKFLAARLAAETGDADGARAYYEEVLAANPLSFEALFENALLMDRSGEGEAAMRRLEEALRVAEEDNKKKEARDVRLIIAQIMFLQKNVDEALGIYDQLTKEDSSDFRPYFCRGMIYSLLDRNEEAKEQFAKYRELSPKKFEVDGYLRTPLSRMKLFSTDES 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02811 288 Coils Coil 208 228 - -
Vian1g02811 288 Pfam Tetratricopeptide repeat 236 265 IPR019734 GO:0005515
Vian1g02811 288 Gene3D Tetratricopeptide repeat domain 68 199 IPR011990 GO:0005515
Vian1g02811 288 SUPERFAMILY TPR-like 98 266 IPR011990 GO:0005515
Vian1g02811 288 Gene3D Tetratricopeptide repeat domain 200 274 IPR011990 GO:0005515
Vian1g02811 288 Coils Coil 179 199 - -
Vian1g02811 288 Pfam Tetratricopeptide repeat 129 158 IPR019734 GO:0005515
Vian1g02811 288 Pfam Tetratricopeptide repeat 200 228 IPR019734 GO:0005515
Vian1g02811 288 PANTHER TRANSMEMBRANE PROTEIN 90 267 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02811 - - gmx:100780000 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02811 1 43955100 43955966 Vian1g02811 1 43955100 43955966 ECH