Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02807 ATGGTTTACGAAAGGATCCAAAAGCCTCAGGGTGGTGGGGGATTTTCACCTGGAAAATTGAGGAACATGCTACTGGGCGTGGAGAAGAAGCGGAAAGGAGAGGAAGAGCTTGATTCTACTTTCACCACGAGATCTCAGAATTCGGACATGGATGAATCTGGTGGTAGCAGTTCTGATCATTGTAAAGATGTAGATGTTGTGAGTGTCCTTCCTGAATATTCAACTTCTGCATTAGTTCGCACCAGTAGCATAGAGGCAGTTGGTGATGATCGTTTTCTGAAGGCTAATGCTGCAGTGACTTCAAGGAATAGAATCTTAGAAGACCCTTCTTCAGATTATGATAGTGGGCATGAAAATATGAGCATCTCATCATCAGTGTTTGAATTTCAGAAGGCCGAGCGGTCTACACAGAGAGTGCCAGTGAGACCATTCTCAAAACCAGCACCATCTAAATGGGATGATGCTCAGAAGTGGATAGCAAGTCCAACATCAAACAGGCCAAAGACAGTGCAGGCTCAAGGGCAAGGTGGGCATGTAGGTCCACGTCAGGTTGGTAGTCTTGGTAGCCGGCAACCTTCAATGAAGGTCGTTGTTGAAGTTCCAGATCAAAGAGAAATTGCTTTAGATGAACCGGATACCAAGCAAATTGATACAAATCAAACTAAGATGGAAAGTGGAGGACAGAAATTTGTGAGTTGGGAGGCTGATCCCTATGCAATTGCAAGTTCTTGTGTTAGCCTTAGCCAGCACAATTCGTCTCTTACCATCCAGAATGCAACAACATTTGTTCCTCCCCCTTCAACTGCTCGGTCTGTATCAATGAGAGATATGGGAACCGAAATGACCCCTATTGCTAGCCAGGAGCCTTCAAGAACAGGTACCCCTGTGAGGGCGACAACACCAATGCGCAGTCCTAACTCTTCTCGGCCTTCTACTCCCCCTAGATCATCCCCTGCATCTACTTTAACTGATCTGCATGGTGACAATCTGAATCTCAACAAGAATGAATTGTCCGAAAAAGAGCTACAAATGAAAACCAGGCGTGAAATAATGGTCCTTGGGACACAACTTGGTAAAATGAATATTGCTGCCTGGGCCAGCAAAGAAGAGGAGGATAAGGATGCATCCACTTCCCTCAAAACAAAACCAGAACCGCCTAAGAGTGTTGTTGAAGCACGTGCAGCAGCATGGGAGGAAGCTGAGAAGGCCAAGTATATGGCCAGGTTTAGGCGTGAGGAGATGAAAATTCAAGCATGGGAAAATCATCAGAAAGCAAAAACAGAAGCCAAGATGAAAAAAATTGAGGTAGAAGTTGAGAGAATACGTAGCAAGGCACATGATAAGCTAATGAATAATTTAGCTTCTGCAAGGCATAAAGCTGAGGAAAAACGAGCAGCAGCAGAAGCCAATAGAAATCATCAAGCTGCAAAAACTGAAGAGCAAGCAGAATATATACGAAGAACTGGTCATGTCCCTTCCTCATATTTATCATTTTCTTGCTGCAATTGGTGCTCTTAA 1518 0.444 MVYERIQKPQGGGGFSPGKLRNMLLGVEKKRKGEEELDSTFTTRSQNSDMDESGGSSSDHCKDVDVVSVLPEYSTSALVRTSSIEAVGDDRFLKANAAVTSRNRILEDPSSDYDSGHENMSISSSVFEFQKAERSTQRVPVRPFSKPAPSKWDDAQKWIASPTSNRPKTVQAQGQGGHVGPRQVGSLGSRQPSMKVVVEVPDQREIALDEPDTKQIDTNQTKMESGGQKFVSWEADPYAIASSCVSLSQHNSSLTIQNATTFVPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVRATTPMRSPNSSRPSTPPRSSPASTLTDLHGDNLNLNKNELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKTKPEPPKSVVEARAAAWEEAEKAKYMARFRREEMKIQAWENHQKAKTEAKMKKIEVEVERIRSKAHDKLMNNLASARHKAEEKRAAAEANRNHQAAKTEEQAEYIRRTGHVPSSYLSFSCCNWCS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02807 505 MobiDBLite consensus disorder prediction 280 332 - -
Vian1g02807 505 MobiDBLite consensus disorder prediction 24 39 - -
Vian1g02807 505 Pfam Remorin, C-terminal region 390 493 IPR005516 -
Vian1g02807 505 MobiDBLite consensus disorder prediction 368 387 - -
Vian1g02807 505 PANTHER OS02G0116800 PROTEIN 102 501 - -
Vian1g02807 505 MobiDBLite consensus disorder prediction 313 332 - -
Vian1g02807 505 MobiDBLite consensus disorder prediction 165 192 - -
Vian1g02807 505 MobiDBLite consensus disorder prediction 283 306 - -
Vian1g02807 505 Coils Coil 446 479 - -
Vian1g02807 505 MobiDBLite consensus disorder prediction 1 62 - -
Vian1g02807 505 MobiDBLite consensus disorder prediction 40 54 - -
Vian1g02807 505 Coils Coil 424 444 - -
Vian1g02807 505 MobiDBLite consensus disorder prediction 462 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02807 Vian-Chr1 43874662 43881728 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02807 - - gmx:100787310 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02807 1 43874662 43881728 Vian1g02807 1 43874662 43881728 ECH