Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02688 ATGGAGGGGATTGGGCAGTTCGAATTAGTGTGCAAGCTCATAAGTGGGTCCAAGTGGAATGAGGAATTTGGAAAAGGTGCCCACCTTTTTTTCTATATGGCAGACGAAGGTGCTAATGCTCTAAATTTAAGTAGAGAAAACTTAAACATTCTTGAGGATTCTTTACTGGCATCTGGGTCTCATGCGGACATTGGAGACTGGCAGCTTCATCTGAAATCAATGGATGATTTGGAGCTGCATTATTCTGGATTTCGCACTCCTCATTTTCACAATTTGTCTGATCTTGTCGAGGAAAATCTTTCATCACAAATAAGAAAGAATGCTCGACTGCTGCTGTCTGACTCATCAGATGATTCTCCAAATGTGTTAATTTTTCAGATTATTGGTGGATTTTCTTTCACAACAGATGTTATATTTATCTCTGGAACTTATTCAGAAAGTTCAAGAGTGGAAGAGCGTGTCACTAGTCTTTCAGGAACCTCATTGTCCAATCAAATGAAATATAAAGAACAAGCATTTGATGAAAAGTTTGACAAAGTTTTCAATTTAGAAGAGAAGGTGGATTCAGAATCCATATCTGTTGGTAAGGCAGCTGTTGGAAACTTATTAGGTGGCATCGGCTACTTCTATGGCCAGTCAAAAATTGCTGTCTCGGGAATCGCCAATATTGGAGATCATGTTAATTATATATCATATTGGCCTGCTGAGCTTTACACAGCAGTACCATGTCGACCTTCTTTTCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTATAATCTGGCGTTGGGATATCCATATTTCACTGGATATCATCGGACACTGGTTGGATTTGATGAATGTTGATGGATGGATACCTCGTGAACAAATTCTCGGAGATGAAGCACTGAGCCGGGTCCCTGAGGAATATGTTCCTCAGCATCCTACTAATGGAAATCCTCCAACTCTGTTTTTAGCATTAAGAGATATAATAAATGGCTTGAAGAATAACGAGTTTACTGCAATGGATAAAACTGACATCCTTGCATTCCTGGAGCGAGCCTTTGTTCGATTAGAAGCATGGTTCCATTGGTTCCATACAACTCAATCAGGGAAACAGATGAGCAGCTACTATTGGCATGGACGGGACAATAAGACTATATATGAATTAAATCCCAAGACACTGTCCTCTGGATTTGATGATTACCCTCGTGCTTCACACCCAACTGCAGACGAACGCCATGTGGATCTTAGATGTTGGATATTACTTGCAGCAGAATCTTTGCATTCCATTGAAGAGTTATTGGATAAGGAAACTACGCCTGGCATGAATTATGGTTACACTGCTCAATTGCTATCAGATATCGAGTTACTGAACCAGATGCATTTTGATGATGCATATGGAGCTTATTTTGACTTTGGGAATCATACAGAAAAGATTCAACTTAAATGGAAAGATGTGGACATAGGACACAACCATGCTGATCGCCAACTTGTCAGGGATGTTTCAGAGAGACCTGTTTTGAGATTGGTTCCTCACATTGGTTATGTTAGCCTATTCCCATTCATGGGGAAGATCATTCCATCTGGATCATGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCACAGCCTCTTTTGGACTGACTATGGACTACGATCGCTTGCCACCACAAGCTCCTTGTATATGAAATTCAACTCAGAGTCTGAGGGCCCATACTGGAGAGGTCAAATTTGGATAAACATAAATTACAGAGTTCTTTCAGCGCTCCACCATTACTCCAAAGAGAATGGACCATATCAGGACAGAGCCAAAGCAATCTACAAAGAACTGAGAAGCAATTTAATTAGAAATATAGTACGCAATTATCAAGAGACTGGATTTTTATGGGAACAGTATGATCAGAATAGCGGTGAGGGAAAAGGGTCGCATCCATTTACTGGCTGGACATCTCTTGTTGTATTAATCATGGCGGAAGAATATGAGAGAGTTTAG 1983 0.4019 MEGIGQFELVCKLISGSKWNEEFGKGAHLFFYMADEGANALNLSRENLNILEDSLLASGSHADIGDWQLHLKSMDDLELHYSGFRTPHFHNLSDLVEENLSSQIRKNARLLLSDSSDDSPNVLIFQIIGGFSFTTDVIFISGTYSESSRVEERVTSLSGTSLSNQMKYKEQAFDEKFDKVFNLEEKVDSESISVGKAAVGNLLGGIGYFYGQSKIAVSGIANIGDHVNYISYWPAELYTAVPCRPSFPRGFLWDEGFHQLIIWRWDIHISLDIIGHWLDLMNVDGWIPREQILGDEALSRVPEEYVPQHPTNGNPPTLFLALRDIINGLKNNEFTAMDKTDILAFLERAFVRLEAWFHWFHTTQSGKQMSSYYWHGRDNKTIYELNPKTLSSGFDDYPRASHPTADERHVDLRCWILLAAESLHSIEELLDKETTPGMNYGYTAQLLSDIELLNQMHFDDAYGAYFDFGNHTEKIQLKWKDVDIGHNHADRQLVRDVSERPVLRLVPHIGYVSLFPFMGKIIPSGSWILEKQLELISNHSLFWTDYGLRSLATTSSLYMKFNSESEGPYWRGQIWININYRVLSALHHYSKENGPYQDRAKAIYKELRSNLIRNIVRNYQETGFLWEQYDQNSGEGKGSHPFTGWTSLVVLIMAEEYERV 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02688 660 Pfam Glycosyl hydrolase family 63 C-terminal domain 158 655 IPR031335 -
Vian1g02688 660 Gene3D - 13 184 IPR038518 -
Vian1g02688 660 Gene3D - 185 659 IPR012341 GO:0005975
Vian1g02688 660 SUPERFAMILY Six-hairpin glycosidases 164 657 IPR008928 GO:0005975
Vian1g02688 660 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 23 657 IPR004888 GO:0004573|GO:0009311
Vian1g02688 660 FunFam mannosyl-oligosaccharide glucosidase 185 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02688 Vian-Chr1 40507622 40516946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02688 17 657 Glycoside Hydrolase AT1G67490 63.240 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02688 K01228 - gmx:100795161 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02688 1 40507622 40516946 Vian1g02688 1 40507622 40516946 ECH