Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02687 ATGACCGGAAGTGGGAGAACCGCCGTTCGGAGCAGAGCGAAATCCCTCTCTGACGCCGATTCTCGTCGAGAAAGGAGACCTCTGTTGAATCGCCACAGAGAGAGAAGCAAATACGGAAGCTCCATTCCGATATTCAATACTGCCAATCTCAAAGTGGTGCTCGGCATATGCTTCGTGGCGTTCTTCACCATCTTCTTTATGATCCGCCACCTAATGAATTCTGCCACAGAACCGAAGCTTCCTCGTGCCGTTACGCCATTTCCCGCGCCAAAGATAATGGACCTACATCAGTTTCAAGGCGAGCACAAGGAGAGTTTGTATTGGGGAACTTATCGGCCTCACACGTATCTTGGGATTCGTGCCCGGACTCCCAAATCTTTGATGGCTGGATTAATGTGGATTGGTGTGAAGGATGGCAGATATCATTTGCGGCATGTCTGCAGACATGAGGATGACCTGAGTACTTATGGTTGGACAAAGCACAATGGACGTGATTTTGGACATCAAGTACTGGTTGACCATGGCATGACCTTGACTACAAGGTTTTTAAAATCAAAAGTAGAAGGCAGTGGTTATGGAGGGGATTGGGCAGTTCGAATTAATGTGGAAATTGACAAGTCTAAGTGGAATGAGGAATTTGGGAAAGGTGCTCAGCTCTTCTTCTATTTGGCCGATGAAGCTGGTAATGCTCTAGATGTAAGTAGAGAAAAATTGAACATTCATGAAGATTCTTTGCTTGCAACCGGCACTCGGGGAGATATTGGAGATTGGCAGCTACATTTTAAATCAATGGATGATTTGGAACTGCATTATTCAGGATTTCGCACACCTCACTTTCACAATTTGTCTGATCTTGTTGAGGAAAATCTTGCATCACAAATACATAAGCATGCTCGACTGCAGCTATCTGACTCATTAGATGATGCTCCAAATGTGTTAGTTTTTCAGATTATTGGTGGATTTCCTTTCACAACAGATATTGTACTAATCACTGGAACTGATATAGAAAGTTCTCAAGAAGAGCGTGTCAGAGAAAATCCAGTTCTTTACATTGATGTAGGAGTTGGTCATTGCCTTGGAAACCTGCTTCTCATGTTGATGGACATTGTTGGGGTTGTTTATAGAGCAGTAGATTCTGAATCCATATCTGTTGCTAAGGCCGCCATTGGAAACTTATTAGGTGGCATCGGCTACTTCTATGGTCAGTCAAAAATTGCTCTTTCAAGAATCCTTAATCTTAGAGAAGATGTCAATTACATATCATATTGGCCTGCTGAGCTTTACACAGCTGTACCAAGTCGATCTTTCTTTCCAAGAGGATTTTTGTGGGATGAAGGTTTCCATCAACTTATAATCTGGCGTTGGGATATTCATATCTCGTTGGATATCATTGGACATTGGTTAGATTTGATGAATGTAGATGGATGGATTCCACGTGAGCAAATTCTGGGGGCTGAATCACTGAGTCGGGTCCCTGAGGAATTTGTTCCTCAACATCCAACAAATGGAAACCCTCCAACTCTGTTTTTAGCATTAAATGTAAAATCTCTGTATTCCTGGAACGTGCCTTTGTTCGATTGGAAGCATGGTTCCATTGGTTTAATACAACTCAATCAGGCACTGTCCTCTGGATTGGATGATTATCCACGGGCTTCACACCCAAGTGAAGATGAGTACCACTTGGACCTTAGATGCTGGATGTTACTTGCAGCTGATTGTATGCGTTCCATTCAAGAGTTGTTGGATATGAAAAACAAACCTGGCATGGATTATGGTTATACTGCTAAATTGCTATCGAATTTTGAGTTACTTAACCAGATGCATTTTGATGATTCATATGGTGCGTACTTTGATTTTGGAAATCATACGGAGAAGGTTCAACTTAGATGGAAGGAAGTTGAAGCAGGAAACTATGCTACTCGCCAACTTGTCCGAGATGTTACGGAGATACCTGTATTGAGATTGGTTCCTCACATTGGCTATGTTAGTTTATTCCCATTCATGGGGAGGATCATTCCATCTGAATCGTGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAACCGCAGCCTCTTATGGACCAATTATGGACTGCGTTCTCTTGCGAAGACAAGTTCTTTGTACATGAAGCACAACACAGAGCACGACCCTCCATACTGGAGAGGTCCAATTTGGATAAACATGAATTACAGAATCCTTTCAGCGCTCTATCATTACTCCCAAGAGAATGGGCCACACCAGGAGAAAGCTAAAGCTGTCTATGAAGAATTGAGAAGCAATGTAATAAGAAATATAGTGCGCAATTATCAACAAAGTGGATTTTTGTGGGAACAGTACGATCAGATTAAGGGTAAGGGAAAAGGGGCACATCCATTTACTGGTTGGACATCGCTCGTAGTATTAATCATGGCGGAAGCATATGGCAATATTTAG 2433 0.4246 MTGSGRTAVRSRAKSLSDADSRRERRPLLNRHRERSKYGSSIPIFNTANLKVVLGICFVAFFTIFFMIRHLMNSATEPKLPRAVTPFPAPKIMDLHQFQGEHKESLYWGTYRPHTYLGIRARTPKSLMAGLMWIGVKDGRYHLRHVCRHEDDLSTYGWTKHNGRDFGHQVLVDHGMTLTTRFLKSKVEGSGYGGDWAVRINVEIDKSKWNEEFGKGAQLFFYLADEAGNALDVSREKLNIHEDSLLATGTRGDIGDWQLHFKSMDDLELHYSGFRTPHFHNLSDLVEENLASQIHKHARLQLSDSLDDAPNVLVFQIIGGFPFTTDIVLITGTDIESSQEERVRENPVLYIDVGVGHCLGNLLLMLMDIVGVVYRAVDSESISVAKAAIGNLLGGIGYFYGQSKIALSRILNLREDVNYISYWPAELYTAVPSRSFFPRGFLWDEGFHQLIIWRWDIHISLDIIGHWLDLMNVDGWIPREQILGAESLSRVPEEFVPQHPTNGNPPTLFLALNVKSLYSWNVPLFDWKHGSIGLIQLNQALSSGLDDYPRASHPSEDEYHLDLRCWMLLAADCMRSIQELLDMKNKPGMDYGYTAKLLSNFELLNQMHFDDSYGAYFDFGNHTEKVQLRWKEVEAGNYATRQLVRDVTEIPVLRLVPHIGYVSLFPFMGRIIPSESWILEKQLELISNRSLLWTNYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWINMNYRILSALYHYSQENGPHQEKAKAVYEELRSNVIRNIVRNYQQSGFLWEQYDQIKGKGKGAHPFTGWTSLVVLIMAEAYGNI 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02687 810 SUPERFAMILY Six-hairpin glycosidases 386 808 IPR008928 GO:0005975
Vian1g02687 810 Gene3D - 93 347 IPR038518 -
Vian1g02687 810 MobiDBLite consensus disorder prediction 13 34 - -
Vian1g02687 810 Pfam Glycosyl hydrolase family 63 N-terminal domain 105 265 IPR031631 -
Vian1g02687 810 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 52 513 IPR004888 GO:0004573|GO:0009311
Vian1g02687 810 MobiDBLite consensus disorder prediction 1 34 - -
Vian1g02687 810 Pfam Glycosyl hydrolase family 63 C-terminal domain 537 805 IPR031335 -
Vian1g02687 810 Pfam Glycosyl hydrolase family 63 C-terminal domain 378 513 IPR031335 -
Vian1g02687 810 FunFam Mannosyl-oligosaccharide glucosidase GCS1 93 349 - -
Vian1g02687 810 Gene3D - 374 809 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02687 Vian-Chr1 40470031 40488772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02687 77 807 Glycoside Hydrolase AT1G24320 51.469 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02687 K01228 - gmx:100795691 1353.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02687 1 40470031 40488772 Vian1g02687 1 40470031 40488772 ECH