Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01859 ATGTCAAAGAGAAGCTGCGTCGTTATTCTGTCATCGGAAGATGAAGACGATACTTCTAACCTTCGCTCGTTGTGTTCCAGTCGCAGTTATACGAAGTCGAAGTCGAGGTCCACCTCAGCATCCTCTCGGGGAAGGAAGAAGGCACGTGCTTCGCATTCTCGCTCTCACCCCTCCAAATTGCACGAGATAGACTTATTTGGAGATGACTTCAATGAAGTGTTTACTGGGTCAAAGGTATCCGCTGGTACTCAAAGGAGCTTTGGGGAGGAGTTATGGGTTGATAAATACAAGCCCAATTCACTGGAAGAGCTTGCTGTTCACAAGAAAAAGGTTGAAGACGTTAAGACGTGGTTTGAAGAGAGGTTGAAACCTTCAAAGGGTGTCTACAATAATAATGTTATCCTCATCAGTGGTCAGGCTGGAGTTGGAAAATCTGCTGCTATTCATGTGATTGCATCTCATCTGGGAGCAATAGTTTATGGGTGGAACACACCTACACCTGTAGTATGGCAAGAGCATCTTTATAATTCTGGCACAGGGACTCAATACACATCCAAGTTAGATGAATTTGAAAGTTTTGTTGAGAGAGTGCGAAAATATGGATTATTGCTAACTTCCTATACTGGGGATTCAAAGCCTCCCATCATACTTTTAATAGACGATCTTCCCATGACTAATGGGAAATCTGCTTTTGGAAGACTTAAAAATTGCTTGCAACTTTTGGTAAAATCAACTCAGATACCCACAGCGATATTGTTAACTGACTGTGGAAATGCTGACTCAGTAGATTATAATGCTCGTTGCCTGGAAGAACTGAAGCTATCTCTGGAGAGTTCTGGGGCTTGTAAGGTTGCTTTCAATCCAATTACAGTGAATTCTATGAAGAAGGTTCTTTTCAGAATATGCCAAATGGAGCGTCGTGATGTGACTGCTGAGTATGTTGATCTAATAGCAAAAACAAGTGGAGGTGACATCAGACATGCAATCACTTCTTTACAGTTTTTCTGCCTGAAACCAAATCTAGTGCATTCTTTGGCCTCTTCCACTTGCTCTCATGGTTCGTTGAAAGAAGAAAATAATAAACCTGATAGATCAGATTATGGATATTCGTTGCACTTTGGAAGAGACGAAGCATTATCTCTATTTCATGCTTTGGGGAAATTTTTGCATAATAAAAGGGAGACTGGAGTTGGAATAGAATTTGATCAAGATGGATTTCTTCTTCGAGAAAGACTTTCAAGATTACCTTTAAAAATGGATGTCCCTGAGAAGATTCTTTGCCAAGCCCATGTGCAACCTGGTTCAGTTGCTGATTTTCTGCATGAAAATGTTCTGGATTTTTTGGATGATGAGGCAATAGATGACGCATGGACTGTGTCTTCATATCTAGGTGATGCTGACATTCTTCTTGCAAAACTCCGGGGAATGCTATGTAGTTATAACGAGGCAGAGGGTGTTTTACAGTCAGCTGCTGCATCCATAGCTGTTCGTGGGGTGCTATTTGGAAATTCTAACCCGATATCCTCCAGGTGGCATGCAGTTCGGCGACCAAGGCTCTGGCAAGTTGAGAAAGTATCATTATACAAGGTAAACGCATTATGGCTGCTCTATATGTTATATATTCAAATTTCTTATCATATGTCAATTATGGCCACTGAGTACATGCCCATGCTTAAATTGCTCGGAAATAGAGCATGTGGATATGATGGACCGAGTCAGAAATCATCACAGAACTTGGAAATGGAAGACTTTGATTTCGACAAAATGGATTTAGATGAACAATCTATGGGCCTTTCCGATGATGACATAGAAGATTGGTAG 1821 0.4119 MSKRSCVVILSSEDEDDTSNLRSLCSSRSYTKSKSRSTSASSRGRKKARASHSRSHPSKLHEIDLFGDDFNEVFTGSKVSAGTQRSFGEELWVDKYKPNSLEELAVHKKKVEDVKTWFEERLKPSKGVYNNNVILISGQAGVGKSAAIHVIASHLGAIVYGWNTPTPVVWQEHLYNSGTGTQYTSKLDEFESFVERVRKYGLLLTSYTGDSKPPIILLIDDLPMTNGKSAFGRLKNCLQLLVKSTQIPTAILLTDCGNADSVDYNARCLEELKLSLESSGACKVAFNPITVNSMKKVLFRICQMERRDVTAEYVDLIAKTSGGDIRHAITSLQFFCLKPNLVHSLASSTCSHGSLKEENNKPDRSDYGYSLHFGRDEALSLFHALGKFLHNKRETGVGIEFDQDGFLLRERLSRLPLKMDVPEKILCQAHVQPGSVADFLHENVLDFLDDEAIDDAWTVSSYLGDADILLAKLRGMLCSYNEAEGVLQSAAASIAVRGVLFGNSNPISSRWHAVRRPRLWQVEKVSLYKVNALWLLYMLYIQISYHMSIMATEYMPMLKLLGNRACGYDGPSQKSSQNLEMEDFDFDKMDLDEQSMGLSDDDIEDW 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01859 606 CDD HLD_clamp_RFC 289 334 - -
Vian1g01859 606 Gene3D - 290 361 - -
Vian1g01859 606 MobiDBLite consensus disorder prediction 39 54 - -
Vian1g01859 606 Pfam Rad17 P-loop domain 88 261 - -
Vian1g01859 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 338 IPR027417 -
Vian1g01859 606 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 75 603 IPR004582 GO:0006281
Vian1g01859 606 FunFam RAD17 checkpoint clamp loader component 89 270 - -
Vian1g01859 606 Gene3D - 89 270 IPR027417 -
Vian1g01859 606 MobiDBLite consensus disorder prediction 22 38 - -
Vian1g01859 606 MobiDBLite consensus disorder prediction 1 57 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01859 K06662 - gmx:100799826 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01859 1 22051664 22056030 Vian1g01859 1 22051664 22056030 ECH