Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01844 ATGTCTGAGATAGTGAAGCAACTGTTGGCGAAGCCGATCCAATTGGCGGACCAAGTCACCAAGGCGGCGGAAGAGGCCAGTTCCTCGTTCAAGCAAGAGTGCTTAGAACTCAAATCCAAGACCGAAAAACTCGCGGGGCTTCTTCGACAAGCAGCGCGTGCGAGCTCCGACCTGTACGAGCGTCCGACGCGGCGCATAATCGCCGACACCGAACTCGTCCTCGACAAGGCGCTGGCTTTGGTGCTGAAATGCCGCGCCAACGGCCTCATGAAGCGCGTGTTCAGCATCATTCCGACGGCGGCGTTTCGCAAGATGTCGTCCCAACTCGAGAATTCTATCGGCGACGTGTCGTGGCTTCTCCGGGTGTCGGCTCCGGCGGAGGATCGCGGTGACGAGTATCTCGGCCTCCCTCCGATAGCTGCCAACGAGCCCATTTTGGGCCTCATTTGGGAGCAGGTGGCGACCCTCCACACGGGCTCTCTCGACGACCGATCTGACGCGGCCGCTTCGTTGGTGTCGCTCGCACGTGACAACGACCGCTACGGGAAGTTGATCATCGAGGAGGGTGGGGTTGGACCCTTGTTGAAGCTGATGAAGGAGGGTAAAAAAGAGGGTCAAGAGAACGCCGCCAGGGCTATTGGGCTTCTTGGTCGTGACCCTGAGAGCGTGGAGATTATGATCCACGCGGGGGTGTGCTCTGTCTTCGCTAAAGTCCTCAAAGAAGGTCCTATGAAAGTTCAAGCTGTTGTTGCCTGGGCCGTGTCTGAGTTGGCCGCCAAGTACCCTAAATGTCCAGATCTTTTCGCTCAGCATAATATCGTTCGCTTGCTTGTAAGTCATCTTGCTTTCGAAACCGTCCAGGAGCACAGTAAATACGCAATTGTTAGCTACAAACCCACCTCAATCCATGCTGTTGTTATGGCTAGTAATAACTCTAATGGTAATAGTTTGAAAAAGGAGAGTGAAGATGAGGAAAAGCTGATGCAGAGTCGCATGCAGCATCCTTTGGGTGATAAGTCCACAAATCAGATGCACAAAGTGGTCACAAGTACCATGGCATTGCATGCTGCCAACAAGCAGCAGCAACAGTCCAATGATGACAATGGAATGGCTCAGAACCCACAGGGTGCTCAGCCAAAGGCCAATGGGAATAGCAATGGCAAGCAAAGCCATCAGTCCCACCAGCAAAGCTATACCTACTCTGGGATTAACATGAAGGGAAGGGAACTGGAGGACCCAGAGAACAAGGCTTACATGAAAGCAATGGCAGCAAGAGCCCTCCGGCAGCTCGCCAAGGGCAACGTAGCCAATTGTCGGAGCATCACTGAATCGAGGGCTCTGTTGTGTTTTGCCATTCTCCTAGAGAAAGGGTCTGAAGATGTGAAGTACAATTGTGCCTTGGCAGTGAAGGAGATCACGGCAGTGGCAGAACAAGATGCAGACTTGAGAAGATCAGCTTTCAAACCCAACTCTCCTGCTTGTAAGGCGGCGGTTGATCAAGTGCTCAAGATCATTGAGAAGGAAGATACAAAACTTCTTATTCCTTGCATAAAGGCTATAGGGAATTTGGCAAGGACATTCCGGGCAACAGAGACAAGGATAATCGGTCCCTTGGTCCGTCTTCTTGATGAAAGAGAAGCAGAAGTGTCAAGGGAAGCGGCAATCTCTCTCACAAAATTTGCCTGCTCGGAAAACTACCTCCACCTTGATCACTCCAAGGCAATTATAAGCGCAGGTGGTGCAAAGCACTTGGTCCAGCTTGTGTATCTGGGAGAACAGACAGTTCAGATTTCAGCACTGGTTCTGCTCTCCTACATTGCATTGCATGTGCCAGACAGTGAGGAACTTGCTCGGGCCGAGGTTCTTGGAGTGTTGGAATGGGCTTCGAAGCAACCTAGCGTGACGCAGGATGAAACCATCGAGGCTTTGTTGCAGGAATCCAAAGGCAGGCTTGAGCTTTATCAGTCTAGAGGTTCAAGAGGATTCCAAAAGTTACATCAATAG 2004 0.5175 MSEIVKQLLAKPIQLADQVTKAAEEASSSFKQECLELKSKTEKLAGLLRQAARASSDLYERPTRRIIADTELVLDKALALVLKCRANGLMKRVFSIIPTAAFRKMSSQLENSIGDVSWLLRVSAPAEDRGDEYLGLPPIAANEPILGLIWEQVATLHTGSLDDRSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLMKEGKKEGQENAARAIGLLGRDPESVEIMIHAGVCSVFAKVLKEGPMKVQAVVAWAVSELAAKYPKCPDLFAQHNIVRLLVSHLAFETVQEHSKYAIVSYKPTSIHAVVMASNNSNGNSLKKESEDEEKLMQSRMQHPLGDKSTNQMHKVVTSTMALHAANKQQQQSNDDNGMAQNPQGAQPKANGNSNGKQSHQSHQQSYTYSGINMKGRELEDPENKAYMKAMAARALRQLAKGNVANCRSITESRALLCFAILLEKGSEDVKYNCALAVKEITAVAEQDADLRRSAFKPNSPACKAAVDQVLKIIEKEDTKLLIPCIKAIGNLARTFRATETRIIGPLVRLLDEREAEVSREAAISLTKFACSENYLHLDHSKAIISAGGAKHLVQLVYLGEQTVQISALVLLSYIALHVPDSEELARAEVLGVLEWASKQPSVTQDETIEALLQESKGRLELYQSRGSRGFQKLHQ 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01844 667 Gene3D - 149 330 IPR011989 -
Vian1g01844 667 Gene3D - 3 122 IPR036537 GO:0007166
Vian1g01844 667 Gene3D - 405 652 IPR011989 -
Vian1g01844 667 MobiDBLite consensus disorder prediction 317 332 - -
Vian1g01844 667 MobiDBLite consensus disorder prediction 311 342 - -
Vian1g01844 667 PANTHER ARMADILLO REPEAT ONLY 4 1 659 - -
Vian1g01844 667 FunFam Armadillo repeat only 2 151 321 - -
Vian1g01844 667 FunFam Armadillo repeat only 4 2 122 - -
Vian1g01844 667 SUPERFAMILY ARM repeat 155 635 IPR016024 -
Vian1g01844 667 SMART arm_5 177 218 IPR000225 GO:0005515
Vian1g01844 667 SMART arm_5 434 474 IPR000225 GO:0005515
Vian1g01844 667 SMART arm_5 490 525 IPR000225 GO:0005515
Vian1g01844 667 SMART arm_5 219 259 IPR000225 GO:0005515
Vian1g01844 667 SMART arm_5 568 608 IPR000225 GO:0005515
Vian1g01844 667 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
Vian1g01844 667 MobiDBLite consensus disorder prediction 357 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01844 Vian-Chr1 21905914 21907917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01844 - - gmx:100794693 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01844 1 21905914 21907917 Vian1g01844 1 21905914 21907917 ECH