Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01827 ATGGCAGAAATTTCAAACTGCTTCACCATCAGACATGCTTATGTTGTTGTATCAAAAGTTGCAGATTCCATGAGTAACAGCAAAATGCGACCAAAGTCAGAGGAAGAAGAGAAAGTGTCGAATGAGAACAATTGGTGGATTCCAGATCCTCTAATTGGCTTCTACAAACCCCTTAACATCAATGACATTGACGCTGCTGAATTACGTGCTAAGTTTTTGCCAAAAAAGTCCAACAAACCATCTTCGGTGACCGGAGCGGCGAAGATTGAGTCGGATCGGAAGAGAAAGAAGGCGTCCACCGCAGCGGCGGATCGGTCGGAGAAGGAAAACAGGAAGAAGAAGGTGAAGATGTCGTCGTCAAAAGTTGGCGGTGAGATTAGGGCTTCGCACATACTAATAAAGCACGAAGGTTCTAGAAGGAAGGCGTCGTGGAAGGATCCAGAAGGACGCATAATCAAGAACACCACAAGAGAAGCTGCGGTTTCTCAGCTCAAGGCCCTTCGCGATGACATCGTCTCGGGCAAGGCAACCTTCGAGGACGTCGCGTCTCGATTCTCCGATTGCGGCTCCGCCAAGCGCGGCGGCGATCTTGGTCCTTTCGGTCGTGGTCAGATGCAGAAGCCTTTTGAAGAGGCAACCCTTGCTCTTAAAGTTGGTGAACTTAGTGACATTGTGGATACCGACAGTGGAGTCCACATTATTAAGAGGACGAAATGA 717 0.4854 MAEISNCFTIRHAYVVVSKVADSMSNSKMRPKSEEEEKVSNENNWWIPDPLIGFYKPLNINDIDAAELRAKFLPKKSNKPSSVTGAAKIESDRKRKKASTAAADRSEKENRKKKVKMSSSKVGGEIRASHILIKHEGSRRKASWKDPEGRIIKNTTREAAVSQLKALRDDIVSGKATFEDVASRFSDCGSAKRGGDLGPFGRGQMQKPFEEATLALKVGELSDIVDTDSGVHIIKRTK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01827 238 FunFam Peptidyl-prolyl cis-trans isomerase Pin1 119 238 - -
Vian1g01827 238 SUPERFAMILY FKBP-like 123 237 - -
Vian1g01827 238 Pfam PPIC-type PPIASE domain 130 237 IPR000297 GO:0003755
Vian1g01827 238 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 123 238 IPR000297 GO:0003755
Vian1g01827 238 MobiDBLite consensus disorder prediction 88 120 - -
Vian1g01827 238 MobiDBLite consensus disorder prediction 76 123 - -
Vian1g01827 238 ProSitePatterns PpiC-type peptidyl-prolyl cis-trans isomerase signature. 178 198 IPR023058 -
Vian1g01827 238 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 79 238 - -
Vian1g01827 238 Pfam Late embryogenesis abundant protein 3 73 IPR004926 -
Vian1g01827 238 Gene3D - 120 238 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01827 Vian-Chr1 21657919 21663697 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01827 K09578 - gmx:100500451 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01827 1 21657919 21663697 Vian1g01827 1 21657919 21663697 ECH