Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01809 ATGGACCCTTTGGAGGTTCAGCCTCCTTGGGTTCCCGAAGACGACCTTCTCCTCAAGAACGCCGTTGAGGCTGGTGCTTCGCTGGAATCGCTGGCAAGAGGAGCTGTTCGGTTCTCGCGGCGGTACTCCTTTAGGGAATTGCAAGATCGGTGGCTGTCTCTGCTCTATGACGGGGATGTTTCCACCGAGGCGGCTCTTGCCATGAGGAATTTGGAGCTGGCCAAGTCAGCTGCTGCCGGTGGTGGTAGTGGTGGGGAGAAGAGGAAATTTCAAAACAGTGGTGGTGTTGGGAAAAAGATGAAATTTCAAAGCGTTCGCAAGCAGTACTGTAGCATGCAGAAAAAACTTCGCCGGCACCGCAGTGGCGTCATGTCTTCCGAGGTAAAGAACGAGGTGGTGGGGTGTGAGGGAAAAGAGAATGTGGTGGTTGACGGTAATTTAAATAGTGATTTTGTGAATAGTAGTGTAGTTGGTTATGGGAATTGCTTGGGGTCAGAGGGGGTAGAGGTGGGGCAATTGGGTGATTTGGTGAGTGATGTACCTCTGTGGAAAACGATTGAGGATGTTTGTTTGCCTGATTTTCCTGTTCATGTTAGTGTGGAGGGTAAAAGTTGTGTTTCTGAAGGGGGAGTGGATTTGAAAGATGAGTGCGGGAATGGTGGGTTGAAATTGAATGCTCCTGATGCCAAAAGTCTCTCAAACTTGGCAAATGAGGATGGACTTCTCTTTATGAATAATGTAGAGGGGAAGGAGGTAATGGCTATGGATAAGAATAAGGATAAGCCGTGTTATGATAATGTTGATTCACTTCTGTTGAGTTCTTCCGCTGATGTTCCTGTATTGCAGAAGTTGGATGTGGAAGCAAAACTTTCTGTGCCTGGTGGGTGTGTTTCTGATGGGCAGGGAATTGCAGCTAATCCATTAGGTGCCAGTTGTGGTGATCAGCATTTCGATTCTGATCCCAGAAACAATGCTGCATTGTCAGCTGTAGCACAAAGTCCTCACTCTGAACACAGTGAGGGATTTATGATCTGTGTGTTGAATACTGAGCACCCTGATATCCCATGCAATGTTAATTTGGACGTGTCCGTCGTGATTCCTGAATTAGCAGCTCTAAAATCCCAACCAGTTGTTAAAGAGGCAGGGTTTTCGGAATCTGCTATTAATAATCAAAGAAGAAATGGACCAGATGGAAGCCTGAAGAAAGAAGCCGTTCTTTCTCAGTCTATTGCTTCAAAAAATTCAAGCTACAAACCTGTTGTGTTTGGACTGAAAAGTGAAAATCCTGGAAGAAACGCTATCACTGCAGTTTCTAGACAGAATAACAATGTTGATGTCAACCCAAGTCATGGCAGATCAGTTCGTGCAACTGTGAAGCCTGCCTTACATGGACATCTGAAACAAGAGGAAAATTTCACTGAAGGTGTATCACATAAACAGGATATCGACGATCCAGTTGCTGCACATGTTAAGGCTGAGGAACATAAAGCTTTATCAAAATCAGAAGCAAAATCATTATCTCTTGATCAGGAAGGAGGTGATATTGAAGACGATGGTGAAGACGATTATGATGATTATTGTGGTGATGAACTTCCTTACTTTTCTGATGTTGAGACAATGATTCTTGAAATGGATTTATCTCCAATGGATCAAGATCCAAACGCAAGGAGAGAAGTATTGAGATATCAACATGAAGAAAGCAGGAAGACCATCATGAGATTGGAGCAAGGTGCCCAGTCCTCTATGGGAAGAGCCATTAGAGCTCAGGGTGCACTTGCAGTAGTGTATGGGCGAATTCTGAAGGAATATATTAGAAAAAGCAAGGTTGTACTTGGCAGAGCAACTAATGATGTACATGTTGATATTGACTTGGGAAAAGAAGGGGAGGAGGTGGCTACAAAAATATCTAGAAGACAGGCTTTAATAAAGCTCGACGCAGATGGTTCTTTCATAATTAAAAATCTTGGCAAGAGATCTATCTTCTTGAATGGCAAAGAAATTGCTACAGGACAAGCGCGGGGTCTTGGTGCTAGTAGTGTGATCGAGATTAGAGGCATTTCACTCATCTTTGAGACCAATAATAGGTGCGTGAAGAGGTTTTTAGAAAATGTGAATGAGAAGGTATGA 2127 0.4396 MDPLEVQPPWVPEDDLLLKNAVEAGASLESLARGAVRFSRRYSFRELQDRWLSLLYDGDVSTEAALAMRNLELAKSAAAGGGSGGEKRKFQNSGGVGKKMKFQSVRKQYCSMQKKLRRHRSGVMSSEVKNEVVGCEGKENVVVDGNLNSDFVNSSVVGYGNCLGSEGVEVGQLGDLVSDVPLWKTIEDVCLPDFPVHVSVEGKSCVSEGGVDLKDECGNGGLKLNAPDAKSLSNLANEDGLLFMNNVEGKEVMAMDKNKDKPCYDNVDSLLLSSSADVPVLQKLDVEAKLSVPGGCVSDGQGIAANPLGASCGDQHFDSDPRNNAALSAVAQSPHSEHSEGFMICVLNTEHPDIPCNVNLDVSVVIPELAALKSQPVVKEAGFSESAINNQRRNGPDGSLKKEAVLSQSIASKNSSYKPVVFGLKSENPGRNAITAVSRQNNNVDVNPSHGRSVRATVKPALHGHLKQEENFTEGVSHKQDIDDPVAAHVKAEEHKALSKSEAKSLSLDQEGGDIEDDGEDDYDDYCGDELPYFSDVETMILEMDLSPMDQDPNARREVLRYQHEESRKTIMRLEQGAQSSMGRAIRAQGALAVVYGRILKEYIRKSKVVLGRATNDVHVDIDLGKEGEEVATKISRRQALIKLDADGSFIIKNLGKRSIFLNGKEIATGQARGLGASSVIEIRGISLIFETNNRCVKRFLENVNEKV 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01809 708 Gene3D - 550 704 - -
Vian1g01809 708 SMART FHA_2 608 667 IPR000253 GO:0005515
Vian1g01809 708 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Vian1g01809 708 SUPERFAMILY SMAD/FHA domain 601 691 IPR008984 GO:0005515
Vian1g01809 708 ProSiteProfiles Forkhead-associated (FHA) domain profile. 609 667 IPR000253 GO:0005515
Vian1g01809 708 MobiDBLite consensus disorder prediction 494 511 - -
Vian1g01809 708 MobiDBLite consensus disorder prediction 494 522 - -
Vian1g01809 708 PANTHER MICROSPHERULE PROTEIN 1 8 707 IPR037912 GO:0002151|GO:0031011|GO:0071339
Vian1g01809 708 CDD FHA_MCRS1 588 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01809 Vian-Chr1 21418747 21422789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01809 - - vra:106769492 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01809 1 21418747 21422789 Vian1g01809 1 21418747 21422789 ECH