Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01789 ATGGCACACCACAACCACTCCACAACTCTTCGAGTTTTCTGCGTCGGAACCCTCGACACCAAGCTCCACGAGCTCCGATTCCTCTCCGATTCACTTCGCTCCAACCTCCACCGCTTCTCCTCCTCCTCCTCCAAGGTAGAGGTGGTGGTGGTTGATGTCTCTACTGGTTCGAATGCGCCACAAAGTTTGCAAGATTTCCCGTTTATTTCCAGGAATGACGTTGTCTCTTCCTACAACACTGGGACAAACGAACCCTTGCTTCTCCCGGATGACAGGGGCAAGGCGGTTGCCGCGATGAGCCAGGCATTTGAGCAGTTCTTGAAGAAGTCTCATGAGGATCAATGTCTTGTTGGTGTTATTGGTGTTGGGGGGAGTGGGGGTACGTCACTGCTGTCGTCTCCCTTCACCTCTCTCCCGATTGGGATCCCCAAGGTCATCGTCTCCACAGTGGCCAGCGGTCAAACTGAACCTTATGTTGGAACCTCAGATTTGGTTTTGTTCCCATCTGTTGTGGACATTGCAGGCATCAACAGGGTTAGCAGACTGATCTTGTCTAATGCCGCGGCTGCATTTGCTGGGATGGTTGTTGGAAGGATTCAGAGCTTAAAGGATTCTTCTAGCGTTGAAGATAAACCTACAGTTGGGATAACTATGTTTGGAGTTACTACTCCTTGTGTTAATGCTGTCCAGGATAGGTTGCATAAAGAAGGTTATGAGACCCTGGTTTTCCATGCAACTGGGGTTGGTGGCAGGGCCATGGAGAATTTGGTTAGAGAGGGGTTTATACAGGGTGTTTTTGACATCACAACGACAGAGGTAGCAGACTACATAGTTGGAGGTGTAATGGCTTGTGACAGTTCTCGTTTTGATGCCATCATAGAAAATAAAATCCCGTTAGTTTTGAGTGTGGGGGCATTAGACATGGTGAACTTTGGAGCAAAAGATACTATACCATCGAAATTTCAGCAGAGAAATATATATGAACACAATAAACAGGTTTCACTCATGCGAACAACAGTAGATGAGAACAAAAAATTTGCTGATTTCATAGCAAAGAAACTGCAGACTTCATCATCTAAGATTTGTGTGTGCCTTCCAGAGAAGGGCGTATCTGCTTTAGATGCACCTGGGAAGCCTTTCTGTGATCCAGATGCAACTGGTACTCTTCTTCGTGAATTACAAAACCTTATTGCGACTAATGGTGATAGACAGGTAAAGGTGTATCCTCATCATATTAATGACCTTGAATTTGCAAATGCATTGGTTGATGCATTTTTAGAGATTAATGAGAAAACTAGTACAGATTCTACTCAACAACAAGTTGTCAATCCTGAATCTGTTGAACAATTTAATGAAGGTTATGTTTCAAATGCATCAAGCTTTGGGACCATCGTCTATCCACCTAGTGAATTCCCAGAAGCTAGAACAGAAACTTTGGAGAAAACACAGCTCATATTACAGCAACTGAAACATCAAATAGATAAAGGAATTCCTATAATAGGAGCTGGTGCAGGGACTGGTATATCTGCCAAGTTTGAAGAAGCTGGAGGGGTTGATCTAATAGTTTTGTACAACTCTGGGCGCTTCCGAATGGCTGGAAGAGGTTCATTAGCCGGATTATTACCTTTTGCTGATGCTAATGCTGTTGTTCTCGACATGGCCAATGAAGTTTTGCCAGTGGTAAAGAAGGTTCCAGTTCTTGCTGGTGTATGTGCAACTGATCCCTTCCGCAGAATGGATTACTTTCTTAGACAGGTGGAGTCTACTGGATTCTCTGGGGTACAAAACTTTCCTACAGTAGGGTTATTTGATGGGAATTTTCGACAAAATCTTGAAGAAACGGGAATGGGATATAGCTTGGAAGTTCAGATGATCCAGAAAGCCCATAAAATGGGTCTCTTGACAACTCCATATGCATTCAATCAACATGAAGCTATTGAAATGGCTAAAGTCGGCGCTGATATTATAGTTGCCCATATGGGTCTAACTACAACAGGCTCCATAGGTGCAAAAACAGCTGTTTCACTTGACGAAAGTGTAATTCGTGTACAAGCTATTGCAGAAGCAGCACACAGCACCAATCCCAATGTCATCGTGTTGTGCCATGGAGGTCCAATATCTGGTCCAAAGGAAGCGGAATTCATATTAAAGAGAACCAAAGGAGTCCATGGGTTTTATGGGGCTTCAAGTATAGAAAGACTTCCGGTAGAGCAGGCTATTACAAATACAGTTAAAGAGTACAAGTCAATTTCTATTCATTAA 2262 0.4377 MAHHNHSTTLRVFCVGTLDTKLHELRFLSDSLRSNLHRFSSSSSKVEVVVVDVSTGSNAPQSLQDFPFISRNDVVSSYNTGTNEPLLLPDDRGKAVAAMSQAFEQFLKKSHEDQCLVGVIGVGGSGGTSLLSSPFTSLPIGIPKVIVSTVASGQTEPYVGTSDLVLFPSVVDIAGINRVSRLILSNAAAAFAGMVVGRIQSLKDSSSVEDKPTVGITMFGVTTPCVNAVQDRLHKEGYETLVFHATGVGGRAMENLVREGFIQGVFDITTTEVADYIVGGVMACDSSRFDAIIENKIPLVLSVGALDMVNFGAKDTIPSKFQQRNIYEHNKQVSLMRTTVDENKKFADFIAKKLQTSSSKICVCLPEKGVSALDAPGKPFCDPDATGTLLRELQNLIATNGDRQVKVYPHHINDLEFANALVDAFLEINEKTSTDSTQQQVVNPESVEQFNEGYVSNASSFGTIVYPPSEFPEARTETLEKTQLILQQLKHQIDKGIPIIGAGAGTGISAKFEEAGGVDLIVLYNSGRFRMAGRGSLAGLLPFADANAVVLDMANEVLPVVKKVPVLAGVCATDPFRRMDYFLRQVESTGFSGVQNFPTVGLFDGNFRQNLEETGMGYSLEVQMIQKAHKMGLLTTPYAFNQHEAIEMAKVGADIIVAHMGLTTTGSIGAKTAVSLDESVIRVQAIAEAAHSTNPNVIVLCHGGPISGPKEAEFILKRTKGVHGFYGASSIERLPVEQAITNTVKEYKSISIH 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01789 753 Gene3D Uncharacterised protein family UPF0261, NN domain 3 201 - -
Vian1g01789 753 Gene3D Aldolase class I 475 728 IPR013785 -
Vian1g01789 753 Pfam Uncharacterised protein family (UPF0261) 11 428 IPR044122 -
Vian1g01789 753 CDD Tm-1-like 11 428 IPR044122 -
Vian1g01789 753 Gene3D Uncharacterised protein family UPF0261, NC domain 211 431 - -
Vian1g01789 753 PANTHER UPF0261 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_1G10120) 9 752 - -
Vian1g01789 753 Pfam Phosphoenolpyruvate hydrolase-like 485 750 IPR009215 -
Vian1g01789 753 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 483 673 IPR015813 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01789 - - gmx:100792647 1265.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01789 1 21056540 21065229 Vian1g01789 1 21056540 21065229 ECH