Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01788 ATGACTGCCATTGATTTACAGAAAAAGGCGATTACTTTATCGAAGCCCATAAGAGAGGAAGCCATTACTGGTTTGTATAGAAGCACACTCCCGAGAAGCTTGGCAATTGCAGATTTGGGTTGCTCTTCTGGACCAAACACTTTCTCTGTGGTGTCTGAACTCATCAAGGCCGTGGAGAAGCTTTGTCGGAAGCTGAACCATAAATCTCCAGAGTACAGGCTGTTTCTGAACGATCTTCCTGGGAATGACTTCAACAGCATCTTTAACTCCCTTGACAGCTTTAAAGAGAAATTGCAAACACAAATGGAAGGTGGGATTGGTCCATGCTACTTCTCCGGAGTTCCGGGTTCTTTCTATAGCAGGGTTTTCCCAGATCAAAGCCTTCATTTTGTTCATTCCTCTTACAGCCTTCAATGGCTATCTAAGGTTCCTGAGGGTATAGACAACAACAGGGGGAACCTTTATATAGGAAGAACAAGCCCACCAAATGTTGCGAGAGCTTACTACCAGCAATTTCAAAGAGATTTCTCTAGTTTTCTCAAGTGTCGTGCAGAGGAACTGGTTGAAGAAGGTCGTATGGTTCTCACAATTTTAGGAAGAAGAAACGATGCCGAGGATCCGGCAAGCAAGGAAGGTGGCTACCTTATTTGGGAGCTTATGGCTATGGCTCTTAGTGAAATGTGTGTGCAGGGAATAATAAAGGAAGAGGAATTGGATAGTCTTAACATCCCACAGTACACTCCATCACCATCTGAAGTGAAATTGGAAGTTCTTAAAGAAGGGTCGTTTGTGATCAATCGTGTAGAGGTGTGCCAGGTGAATTGGAATCCTCTTGAAGATTGGAACGCTCTTGAGTTTGAATGTGAAAGGTCTGAATCACTTCGAGACAGTGGATATAACCTCGCACAGTGCATGAGGTCTGTGGCAGAACCTATTCTGGTTAGCCACTTTGGTGAACATATCATTGAAGAGGTTTTCAGCCGTTTCCAGAAAATTCTGACTGATCGTATGTCTAAGTGTAAAACCGAGTTCAGCAACATTACGATATTGATGACTAGGAAAGCATAG 1068 0.4345 MTAIDLQKKAITLSKPIREEAITGLYRSTLPRSLAIADLGCSSGPNTFSVVSELIKAVEKLCRKLNHKSPEYRLFLNDLPGNDFNSIFNSLDSFKEKLQTQMEGGIGPCYFSGVPGSFYSRVFPDQSLHFVHSSYSLQWLSKVPEGIDNNRGNLYIGRTSPPNVARAYYQQFQRDFSSFLKCRAEELVEEGRMVLTILGRRNDAEDPASKEGGYLIWELMAMALSEMCVQGIIKEEELDSLNIPQYTPSPSEVKLEVLKEGSFVINRVEVCQVNWNPLEDWNALEFECERSESLRDSGYNLAQCMRSVAEPILVSHFGEHIIEEVFSRFQKILTDRMSKCKTEFSNITILMTRKA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01788 355 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 6 340 IPR005299 GO:0008168
Vian1g01788 355 Gene3D Vaccinia Virus protein VP39 6 341 IPR029063 -
Vian1g01788 355 Gene3D - 142 340 IPR042086 -
Vian1g01788 355 Pfam SAM dependent carboxyl methyltransferase 21 353 IPR005299 GO:0008168
Vian1g01788 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01788 Vian-Chr1 21044470 21045699 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01788 K21483 - gmx:100794757 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01788 1 21044470 21045699 Vian1g01788 1 21044470 21045699 ECH