Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01778 ATGGCAGCAGAATCATCAGAGGGCGAAGAAGAAACGAAGTTGAGCGGAGGAAACCAATTGTTGACGGTAGATGATGATTTAACGGAGATGGGGAAAAAGGCCGCTTGGAGTGTCAGTTCTTGCAAACCCGGTAACGGTGTTTCCTCCCTCCGTGACGATAATCTCGAAACCTATTGGCAATCCGACGGAGCGCAACCCCATTTGGTTAACATTCAGTTTCAGAAGAAAGTGAGACTTCAACTAATTGTACTGTACGTGGATTTCAAGTTGGACGAGAGTTACACGCCGAGCAAAGTTTCCATCCGTGCCGGTGATGGGTTTCACAACTTGAAGGAGATTAAGACCGTGGAACTTGTGAAGCCAACTGGGTGGGTCTATCTATCGTTGTCTGGAGTTGATCCTAGGGATACCTTTGTGAACACTTTCATGTTGCAAATTGCTGTATTGTCAAACCATCTCAATGGAAGAGATACTCATGTGCGGCAAATCAAAGTTTATGGGCCTCGACCGAATCCAATTCCACACCAGCCATTTCAATTTACTTCAAGGGAGTTTATCACCTACTCTTCCATAAGATGA 579 0.4542 MAAESSEGEEETKLSGGNQLLTVDDDLTEMGKKAAWSVSSCKPGNGVSSLRDDNLETYWQSDGAQPHLVNIQFQKKVRLQLIVLYVDFKLDESYTPSKVSIRAGDGFHNLKEIKTVELVKPTGWVYLSLSGVDPRDTFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPHQPFQFTSREFITYSSIR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01778 192 Gene3D - 1 169 - -
Vian1g01778 192 FunFam Anaphase-promoting complex subunit 10 1 169 - -
Vian1g01778 192 CDD APC10 29 167 IPR016901 GO:0005680|GO:0031145
Vian1g01778 192 SMART APC10_2 27 191 IPR004939 -
Vian1g01778 192 MobiDBLite consensus disorder prediction 1 20 - -
Vian1g01778 192 SUPERFAMILY Galactose-binding domain-like 22 168 IPR008979 -
Vian1g01778 192 ProSiteProfiles DOC domain profile. 6 192 IPR004939 -
Vian1g01778 192 Pfam Anaphase-promoting complex, subunit 10 (APC10) 19 189 IPR004939 -
Vian1g01778 192 PIRSF APC10 2 192 IPR016901 GO:0005680|GO:0031145
Vian1g01778 192 PANTHER ANAPHASE-PROMOTING COMPLEX 10 7 192 IPR016901 GO:0005680|GO:0031145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01778 K03357 - gmx:100526925 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01778 1 20885587 20887360 Vian1g01778 1 20885587 20887360 ECH