Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01760 ATGGCCATTGAAATGAAAAAGAAGACTTCAAGAGCAGCAGCAACCGCAATATGGCTGGTGTCGTGGAGCATTATCATGGCCTACAATGTGAGTTATGCAGAAAGAGTTTTGAAAAACCAAACCCACCAGAGTTTTTCTGCAAAACAAAGACATGGAGCTTTGAATAGTATAATTGATTTCTTTTGGAACGATGGAGGAGATTCTTCCAATGACCGTGTTTGGCCTGAGATGAAGTTTGGTTGGAGAATATTGGTAGGGTCAATCGTTGGATTCTTTGGAGCTGCGTTGGGAAGCGTAGGAGGGGTTGGAGGTGGAGGAATTTTCATCCCAATGCTCACTTTGATCATTGGTTTTGACGCTAAGTCTTCCACTGCCATTTCTAAGTGTATGATTATGGGAGCAGCGGTATCAACTGTATATTATAACCTGAGGTTTAGACACCCAACACTAGATTTGCCAGTTATAGATTATGATCTGGCTTTGCTATTCCAGCCTATGCTAATGCTAGGAATAAGCATTGGTGTTGCATTTAATGTCATGTTTGCTGATTGGATGGTGACGGTTTTGCTTATCATCTTATTTATTGCTACCTCCACAAAAGCTTTGTTCAAAGGCATAGATACATGGAAAAAGGAAACAACTATGAAAAAGGAGGCAGCTAAGATGTTGGAATCAGATTCTTTTCCTGGTTATGATTCTGAAGAAGACTATAAGCCACTACCAGCTGGTTTGACTGATCCACGAGATGAGAAGGTCCCTTTACTAAAGAACATCTACTGGAAAGAATTATTAGTCCTTGTCTACGTTTGGGTGGCTTTTCTCATCGTTCAGATCATTAAGACATACAGCAAAACTTGCTCCACACTGTACTGGATTCTTAATTTACTACAGGTGCCTATTGCAGTCTCTGTTACGCTTTATGAAGCCATATGCTTGTGCAATGGAAGTAGAGTGATTGCATCAAAGGAAAAGGAAATAACAGATTGGAAGAAGCTTCACAAGATCTGCCTTTACTGTTCCTGTGGTATAATAGCTGGTATAGTTAGTGGACTGCTTGGTCTTGGTGGTGGCTTCATTTTGGGGCCACTCTTTCTGGAGTTGGGAATTCCTCCTCAGGTTGCCAGTGCTACATCAACTTTTGCTATGGTTTTCTCTTCCTCCATGTCAGTCGTACAATACTATCTTCTAGAACGCTTCCCAGTTCCCTATGCTTCTTACTTTATTTTGATTGCAACCATAGCTGCGTTAACTGGGCAGCATGTGGTGAGAAAGATAATAGCTATCTTGGGACGAGCATCCATCATCATCTTTGTTCTAGCTTTCACCATTTTTTTGAGTGCAATAAGTTTAGGTGGAGTGGGAATTGGGAACATGGTTGAGAAGATGGAAAATAACGAGCATATGGGATTTAGAAATATCTGCCATCAATCTTAG 1434 0.4093 MAIEMKKKTSRAAATAIWLVSWSIIMAYNVSYAERVLKNQTHQSFSAKQRHGALNSIIDFFWNDGGDSSNDRVWPEMKFGWRILVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDAKSSTAISKCMIMGAAVSTVYYNLRFRHPTLDLPVIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIATSTKALFKGIDTWKKETTMKKEAAKMLESDSFPGYDSEEDYKPLPAGLTDPRDEKVPLLKNIYWKELLVLVYVWVAFLIVQIIKTYSKTCSTLYWILNLLQVPIAVSVTLYEAICLCNGSRVIASKEKEITDWKKLHKICLYCSCGIIAGIVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYLLERFPVPYASYFILIATIAALTGQHVVRKIIAILGRASIIIFVLAFTIFLSAISLGGVGIGNMVEKMENNEHMGFRNICHQS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01760 477 PANTHER CEREBLON 52 474 - -
Vian1g01760 477 Pfam Sulfite exporter TauE/SafE 340 445 IPR002781 GO:0016020
Vian1g01760 477 Pfam Sulfite exporter TauE/SafE 84 198 IPR002781 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01760 Vian-Chr1 20618986 20622541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01760 - - gmx:100816633 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01760 1 20618986 20622541 Vian1g01760 1 20618986 20622541 ECH
Vian10g00692 10 6673740 6676865 Vian1g01760 1 20618986 20622541 PCT