Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01759 ATGAGACATAGGATTTCCTATTTGATGGACGAGATCTGGGAGCGGGCTGTGGAGACCGCCTTAGACGGCGAGAAGGACCATGCGTCCGCCCGGACGCTAACCCTAGACGGCGCCGTTAAGTGCGTGCAGGGACGCTTACCTCCTCCGACCCTACTTGAAAGGTTCCAGAACCTTCAGCACCTTTCCATCGCAAACGTTGGTGTTTCAACGTTGGAGCAGTTTCCGCGGCTCCGGAATCTGCAAAAGCTGAACCTCTCCGACAACCGGATCGCTGGAGGGTTGGAGTTTCTTGTCCAGGCTGGCCTCGATTCGCTGCGTGACCTTGATTTGTCGAACAATCGGATTCAGTACATTGAGGATCTCGCGCCGCTGGCGCAGGTCAAGCTGGTTTCGCTGGATCTGTACGAGTGTCCCGTGACGCGTGTGAAGGATTATCGATCTAGGGTTTTTGGGTTGATTAAGTCGCTCAAGTACTTGGATAAGATGGATGCGGAGGAGAACGAGAGGCCTGAAAGTGATGATGAAGAAGAGGAGGAAGAGGAAGAGGAGGAGGAAGATGACCCTGGGAGTGGCGAGATTGACGGAGAAGAAGATCGACCTCATGGTATTAACAATGGACACAGCGAGGGCGTTGATGGTGTTGTTGATGCTGATGAGGAGGAAGAGAGTGATGCGGATGAAGAGGAGACGGAGACGTCGAGGCGGGTTACCAATGGCGATAATCACCGGGAGAATGGATTCCGTGTTGTGCCTGTAGAAGGGGATGACGTGGAGGAGGACGATGACGAGGATGATTCTGGTGAGGAAATTGATGAGGAGGAGGGCGATGATGATGATGATGTGGTTGAGGTTCATGAGATTGAGGATAGCGACGATGAGGATGGAGTGGAATATGATGAGGACGATGACGATGATGACGACGATGAGGAGGAGGTGGATAATGATGAGGGTGATTTTGCGGAGCCGGAGAGTACTGGGAGGTTAACGAGTACCGAGGGCGAGATTGATGGACATGAACAGGGGGAGGAGGATGGAGATGAGGATGATAATGGGGAGACTGGGGAAGATGAGATGGGGGTTGAAGACGATGGCGATTTTGAAGATGACGATGAAGAAGAAGACTATGGTGGTGGGTACCTTGTTCAGCCAGTTGGACAGTCTGATGCTCTGAATTCTGGAGTTGTTGCTGATGTGGATGGTGGAAATGATGAGGGTGAAGAGGAGGATGAAGTTGATGATGACGATGAAGATGTTCAGGTGTTACCTCCTGACTCATCACACCTGAAGAGGAAGAGGAATGATGAAGAGGAGGATGATGAGGAGAGTGACGATGAAGATGTGGTAGCATTCACTAAGTCATCGAAGAAACATCATTGA 1377 0.5134 MRHRISYLMDEIWERAVETALDGEKDHASARTLTLDGAVKCVQGRLPPPTLLERFQNLQHLSIANVGVSTLEQFPRLRNLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQYIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEEEEEEEEEDDPGSGEIDGEEDRPHGINNGHSEGVDGVVDADEEEESDADEEETETSRRVTNGDNHRENGFRVVPVEGDDVEEDDDEDDSGEEIDEEEGDDDDDVVEVHEIEDSDDEDGVEYDEDDDDDDDDEEEVDNDEGDFAEPESTGRLTSTEGEIDGHEQGEEDGDEDDNGETGEDEMGVEDDGDFEDDDEEEDYGGGYLVQPVGQSDALNSGVVADVDGGNDEGEEEDEVDDDDEDVQVLPPDSSHLKRKRNDEEEDDEESDDEDVVAFTKSSKKHH 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01759 458 Gene3D Ribonuclease Inhibitor 10 175 IPR032675 -
Vian1g01759 458 Coils Coil 162 182 - -
Vian1g01759 458 ProSiteProfiles Leucine-rich repeat profile. 79 98 IPR001611 GO:0005515
Vian1g01759 458 MobiDBLite consensus disorder prediction 214 228 - -
Vian1g01759 458 MobiDBLite consensus disorder prediction 163 458 - -
Vian1g01759 458 SMART LRR_sd22_2 77 96 - -
Vian1g01759 458 SMART LRR_sd22_2 102 123 - -
Vian1g01759 458 MobiDBLite consensus disorder prediction 420 436 - -
Vian1g01759 458 MobiDBLite consensus disorder prediction 400 419 - -
Vian1g01759 458 SUPERFAMILY L domain-like 48 164 - -
Vian1g01759 458 MobiDBLite consensus disorder prediction 337 376 - -
Vian1g01759 458 MobiDBLite consensus disorder prediction 229 253 - -
Vian1g01759 458 FunFam acidic leucine-rich nuclear phosphoprotein 32-related protein-like 13 175 - -
Vian1g01759 458 Pfam Leucine-rich repeat 64 174 - -
Vian1g01759 458 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 18 444 IPR045081 -
Vian1g01759 458 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Vian1g01759 458 MobiDBLite consensus disorder prediction 254 319 - -
Vian1g01759 458 MobiDBLite consensus disorder prediction 167 193 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01759 - - gmx:100809629 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01759 1 20603119 20605950 Vian1g01759 1 20603119 20605950 ECH