Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01758 ATGAAGGATGAAGAGACACTCCCAATTGCGAAAAAGGAAACCCTAACTTCAGATTCAGGTTTATTCGGAAGAGGAAGTTACAAATTTTGGGCACTGGCGGCCATTTTGCTCCTCGCACTGTGGTCCATGTTCACCGGCACCGTCTCGCTCCGGTGGTCGGGCACGCTCAACACCTTCTCCCATGACCTCCACGTGCCGCTCCACGACCACCTCGACGTCCTCGAAATGGAGGAGAGAGAGAAGGTGGTGAGGCACATGTGGGACGTGTACACGAATAACCGTAGGACCAGGTTGCCTCGGTTCTGGCAAGAGGCCTTCGAGGCTGCGTACGAGGATTTGAGCAGTGACGTGGCGGAGGTTAGAGACGCTGCCATCGCCGAGATCGCTAACATGTCTCTAAGCTCCTTTGATATTCAATTGCCTCCTGTCACACATTCTACGAAAGCACAGGAAGTTGATAAGAACCGCGAGCAATTGGAGAAAGGTAAAGGTGTAACCTCCAAACGTGCATAG 513 0.5263 MKDEETLPIAKKETLTSDSGLFGRGSYKFWALAAILLLALWSMFTGTVSLRWSGTLNTFSHDLHVPLHDHLDVLEMEEREKVVRHMWDVYTNNRRTRLPRFWQEAFEAAYEDLSSDVAEVRDAAIAEIANMSLSSFDIQLPPVTHSTKAQEVDKNREQLEKGKGVTSKRA 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01758 170 PANTHER OS03G0411600 PROTEIN 2 162 IPR010608 -
Vian1g01758 170 MobiDBLite consensus disorder prediction 146 170 - -
Vian1g01758 170 MobiDBLite consensus disorder prediction 149 170 - -
Vian1g01758 170 Pfam Protein of unknown function (DUF1195) 14 141 IPR010608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01758 Vian-Chr1 20591456 20594140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01758 - - var:108328789 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01758 1 20591456 20594140 Vian1g01758 1 20591456 20594140 ECH