Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01746 ATGGCTTTTAAGAAAACCCTAGCCCAGCGCCTCCTCAACATCACCAAAATCTCCAATTACCGCATTTCCTCCTCCGTTCGTTCTCCCAATCCGGCCAAACCTGACATTGCCCCGGATCCCGGAGATAGCGGAATCTTCCGCCGCTTCCTCCACAAGAGGCCAGTCTTCTCCTCGGAGCTTCGACAGCCGGCTTCCGGATCCATCCTCCACCGCCTCCGGGAGATGGACATTGCACGGAGCCGGATCCGGTTGGACGGACTCACTCCACCGGAAAAACAAGAAGTGGGGGCCAAAGATGTGAGGAAGGTGCTCAGAGCCATTCAAATAGAAACAGTGAAATCCAAGTTACGGAAAATTCCGGAGAGTTGCATACCTTACTCGGATTTCATGCGAATGTGCGTGGAGGGTTGCTCCGATCCGGAGCAAGCGAGGAGCATCGCGCAGATGCTGGACGATTCAGCCTCTGTTATCATCTTAGGCGATGTCGTTTTCCTCCGACCTGAACAGGTAGCAAAAACCATTCAGTCTATCCTACCTCTAGCAGGAGCAAGGACTATTGAGTCAGAAAGAAAAGAGTTGGAAGAAATGGAGAAAGTAAAAGCAGCAATTGACGAGAGAGCGAACACGTTGGTTCGACGGGAACTGTGGGCTGGGTTGGGGTTCCTAGTGGCACAGACATTAGGATTCATGAGACTCACATTTTGGGAACTATCTTGGGATGTGATGGAACCAATATGCTTCTATGTTACTTCCATGTACTTCATGGCTGGCTACACCTTCTTCGTCAGAACCTCCATAGAGCCTTGCTTTGAAGGCTTCTACCAAAGCCGTTTCACCAGCAAGCAGAAGCGTCTAATGAAACTTCACAATTTTGACATTGACAGGTATAAGGAACTCAAGGCTGCTGCTGCACCACCATCGCCACCCTCTTTCCAGATTGATACATCATTTGCTATTCAACCATTTCAGCAATTTCACAAAAACTTGTAG 990 0.4949 MAFKKTLAQRLLNITKISNYRISSSVRSPNPAKPDIAPDPGDSGIFRRFLHKRPVFSSELRQPASGSILHRLREMDIARSRIRLDGLTPPEKQEVGAKDVRKVLRAIQIETVKSKLRKIPESCIPYSDFMRMCVEGCSDPEQARSIAQMLDDSASVIILGDVVFLRPEQVAKTIQSILPLAGARTIESERKELEEMEKVKAAIDERANTLVRRELWAGLGFLVAQTLGFMRLTFWELSWDVMEPICFYVTSMYFMAGYTFFVRTSIEPCFEGFYQSRFTSKQKRLMKLHNFDIDRYKELKAAAAPPSPPSFQIDTSFAIQPFQQFHKNL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01746 329 Coils Coil 186 213 - -
Vian1g01746 329 Pfam Mitochondrial calcium uniporter 141 299 IPR006769 -
Vian1g01746 329 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 31 304 IPR039055 GO:0051560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01746 Vian-Chr1 20332860 20336357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01746 K20858 - gmx:100809065 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01746 1 20332860 20336357 Vian1g01746 1 20332860 20336357 ECH