Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01728 ATGTTACGGGCATGTTTTGGGTTGAATTACCATGGTAGAATGGAGGAGCTGCCAGGGGCGTTTGGAAGCAGCGCCAGTTTGGCTCTCCGATTGGGTCAAACAGTTTTTTCCACAGCTTCCCTTCTATTCATGTGTTTGGATGTTGATTTCTACGGTTACACTGCTTTCTGCTATTTGGTAACAGTCATGGGTTTGGTAATTCCCTGGAGCATAACACTGTTGGTTGTGGATGCATACTCTGTGTTTATAAAATGTTTACCCCTCCAACGAAGACTCGTAATGATAGTCTTTTTGGGAGACATGATTTTGTCATATCTGTCATTAGCTGCAGCATGTTCAACAGCCAGTGTCACAGATCTGCTGCTCGATGCCGATCGATCCTATTGCCCAGCAAAGCTATGCGGTAGATATCAACTATCTGCTGCTATGGCCTTCTTGTCTTGGTTTCTTTCATCAGCCTCTTGTCTGTTTAACTTCTGGCTTTTCCCTTCTTTGTAA 498 0.4418 MLRACFGLNYHGRMEELPGAFGSSASLALRLGQTVFSTASLLFMCLDVDFYGYTAFCYLVTVMGLVIPWSITLLVVDAYSVFIKCLPLQRRLVMIVFLGDMILSYLSLAAACSTASVTDLLLDADRSYCPAKLCGRYQLSAAMAFLSWFLSSASCLFNFWLFPSL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01728 165 Pfam Casparian strip membrane protein domain 22 150 IPR006702 -
Vian1g01728 165 PANTHER CASP-LIKE PROTEIN 5B3 14 164 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01728 Vian-Chr1 20068841 20070730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01728 - - gmx:100791729 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01728 1 20068841 20070730 Vian1g01728 1 20068841 20070730 ECH