Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01726 ATGCGTAGAATATTACAACAGTACGTGGATACGAAAAGCGATACTGTAGTTGATAGTTTAATTGATTCCGATCTAAACGAGCTAAAGCTTGCGGCCAAGAAGCTCCTCCACGATGCAACCCTGGTAGGAGGCAAAGCCTTTGGCGGTTCTTTCTTTAAATGGCTCGCTTCCTTCGCTGCCATCTTTCCTGAATCGCTGTTCTCCTTTTTAAGAGGTGATGTGGGAAAATGGATTGCATTCGTCGCAGTTGTGCTGAGGCTTTTCTTCCCTAGACATTTTCCTGATTGGCTGGAAATTCCTGGTTCAATGATTCTTATTTTGATAGTAGCCCCCGACATATTTGCTCAGAAATTAAGGAATAACTGGATTGGATTAGCGATTGATCTTTTCATTGGTTGTTACCTTCTACAAGAACATATCAGGGCTTCTGGTGGATTCAGAAATTCTTTCACACAGAAACATGGAATATCAAATACTCTTGGCATCCTCCTCCTCATTGTCTATCCTATTTGTGCATTCATTATCCATTAA 531 0.4124 MRRILQQYVDTKSDTVVDSLIDSDLNELKLAAKKLLHDATLVGGKAFGGSFFKWLASFAAIFPESLFSFLRGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSMILILIVAPDIFAQKLRNNWIGLAIDLFIGCYLLQEHIRASGGFRNSFTQKHGISNTLGILLLIVYPICAFIIH 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01726 176 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 16 62 IPR008892 GO:0016020
Vian1g01726 176 Pfam Cold acclimation protein WCOR413 12 61 IPR008892 GO:0016020
Vian1g01726 176 Pfam Cold acclimation protein WCOR413 62 165 IPR008892 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01726 Vian-Chr1 20048435 20049285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01726 - - gmx:100817084 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01726 1 20048435 20049285 Vian1g01726 1 20048435 20049285 ECH