Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01691 ATGGCGCAATGGTGGCGTTCCGCCGCCGGCCACTACCGTACTATGGCAGCGAGCCGTTGTTCGTCATCTGCTTTCCGGTGCAGCCATTATCATACGATCCAAGCCATCCCAAGGGAGTGCACAGGCAGCAAAGTCTCAGCGAGAGACCGAGTGCAAGGTCGAATACCCGCCGTCCTTTTCTTCCAGAACCTTCTGGAGAAAAATCCCGACAATCGAACAGAATCGAAGAAGTACTTGCTAACCGTCGAGAAGAAGCAGATTAAGGCCATTCTTGACTCCGTCCACGCTCCTACCTTCTGCTCCACTCGCTTTCCGCTCCAGATCCGTGCGGGATCCGGGTCTTCTCATTTGGTCGAATCGGGAACCGTTTTACCTCTCAAGATTCATAGGGACGAAGAGAGTGGGAAGATTCTGAATTTGGTGTTTGTTTGGGCTGAGGACGGAATGAAATTGAAAGTGGATGTGCCTGTTATTTTCAAAGGGGAAGATGTTTGTCCTGGTATTCAGAAAGGAGGAATTTTGAACAAAATCAGACCTAGTCTAAAATATCTTGGCCCATCTGAGCACATTCCTTCAAAAATTGTTGTGGATGTGAGCAATCTAGATATTGAAGATAGAATATTCATGCGTGACATTGAGGTCCATCCATCCTTGAAGCTTCTCAGTAAGAATGAAAACATGCCCATATGTAAAGTAGTTCCAACAAGCTTGGGAAACCGAGAACCTATTGTGGAGTGA 738 0.4729 MAQWWRSAAGHYRTMAASRCSSSAFRCSHYHTIQAIPRECTGSKVSARDRVQGRIPAVLFFQNLLEKNPDNRTESKKYLLTVEKKQIKAILDSVHAPTFCSTRFPLQIRAGSGSSHLVESGTVLPLKIHRDEESGKILNLVFVWAEDGMKLKVDVPVIFKGEDVCPGIQKGGILNKIRPSLKYLGPSEHIPSKIVVDVSNLDIEDRIFMRDIEVHPSLKLLSKNENMPICKVVPTSLGNREPIVE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01691 245 Gene3D Ribosomal protein L25, beta domain 149 227 IPR037121 -
Vian1g01691 245 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 26 235 - -
Vian1g01691 245 Pfam Ribosomal protein TL5, C-terminal domain 150 235 IPR020057 -
Vian1g01691 245 SUPERFAMILY Ribosomal protein L25-like 30 236 IPR011035 GO:0006412
Vian1g01691 245 CDD Ribosomal_L25_TL5_CTC 32 91 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Vian1g01691 245 FunFam Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein 148 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01691 Vian-Chr1 19519825 19523698 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01691 K02897 - gmx:100802599 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01691 1 19519825 19523698 Vian1g01691 1 19519825 19523698 ECH