Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01392 ATGGGTTCCAAAACTAGCTCTTCCCTTGCTCTTTTCTTCACATTCAACATCCTCTTCTTTGCCCTTGTCTCTGCTTGTGGGACTTGCCCTGGGCCACACCCTAGGCCAAAGCATAAGCCTGTCAAACCAAGTCCTTCAGGTGGTTCGGGTGGTTCAGGTGGCTCGGGAGGTTCCGGTGGCTCAGGTGGTTCGGGTGGTTCAGGTGGCTCCGGTGGATCTGGTGGTTCAGGAGGCTCTGGTGGTTCTGGGACCACATGCCCCCGTGATGCACTTAAACTAGGAGTGTGTGCCAATGTGCTAAACGGGTTGGTGAACGTCACCTTGGGTCAACCACCAGTTACCCCTTGCTGTAGCCTCCTCAATGGTCTGGTTGATCTTGAGGCTGCAGTGTGTCTCTGCACTGCCCTTAGAGCAAATATTTTGGGTATCAACCTCAACCTTCCCATCTCACTCACCTTGCTTCTCAACGTTTGCTCTATACAACCCCCACGTAATTTCCAATGTTCCTAA 510 0.5255 MGSKTSSSLALFFTFNILFFALVSACGTCPGPHPRPKHKPVKPSPSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGTTCPRDALKLGVCANVLNGLVNVTLGQPPVTPCCSLLNGLVDLEAAVCLCTALRANILGINLNLPISLTLLLNVCSIQPPRNFQCS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01392 169 PANTHER - 6 168 - -
Vian1g01392 169 MobiDBLite consensus disorder prediction 32 81 - -
Vian1g01392 169 SMART aai_6 86 168 IPR016140 -
Vian1g01392 169 MobiDBLite consensus disorder prediction 48 81 - -
Vian1g01392 169 CDD HPS_like 84 168 IPR027923 -
Vian1g01392 169 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vian1g01392 169 Pfam Hydrophobic seed protein 85 169 IPR027923 -
Vian1g01392 169 Gene3D - 84 169 IPR036312 -
Vian1g01392 169 FunFam pEARLI1-like lipid transfer protein 1 84 169 - -
Vian1g01392 169 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 88 168 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01392 Vian-Chr1 15293584 15294093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01392 85 168 Acyl Lipid Metabolism Gene Families AT4G22490 40.476 2.59e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01392 - - gmx:100798361 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01392 1 15293584 15294093 Vian1g01392 1 15293584 15294093 ECH