Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01391 ATGGAGTCTTCTAGATCTTCAACTCTAGCTCTTTTTTTTACCATCAATTTGCTTTTCTTTGCCATGGCAAGTGGCTGCTTCACTTGCACACAGCCAAAGCCTAACCCATTCCCTTATCCTAACTCTAACCCTACTCCTCCTGCAAAGAGCTGTCCCAGGGATGCACTTAAGCTGGGTGTGTGCGCTAACGTGCTTAATGGACCAATTGGTGCGGTGGTGGGATCACCACCGGACCACCCATGTTGCTCGGTGCTAGAAGGGCTTCTTGATCTTGAAGTCGCGCTTTGCCTCTGCACTGCCATCAAAGCTAACATACTTGGCATTAACCTTAACATTCCCATTTCACTAAGCTTGATCCTTAACGCCTGTGAGAAGTCGCCACCCTCTGACTTCCAGTGCAGCTAG 405 0.4889 MESSRSSTLALFFTINLLFFAMASGCFTCTQPKPNPFPYPNSNPTPPAKSCPRDALKLGVCANVLNGPIGAVVGSPPDHPCCSVLEGLLDLEVALCLCTAIKANILGINLNIPISLSLILNACEKSPPSDFQCS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01391 134 Pfam Hydrophobic seed protein 51 134 IPR027923 -
Vian1g01391 134 Gene3D - 48 134 IPR036312 -
Vian1g01391 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 53 133 IPR036312 -
Vian1g01391 134 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vian1g01391 134 CDD HPS_like 50 133 IPR027923 -
Vian1g01391 134 PANTHER - 6 133 - -
Vian1g01391 134 SMART aai_6 51 133 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01391 Vian-Chr1 15281126 15281530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01391 42 133 Acyl Lipid Metabolism Gene Families AT4G22490 39.362 1.19e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01391 - - gmx:100527818 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01391 1 15281126 15281530 Vian1g01391 1 15281126 15281530 ECH