Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01384 ATGTCTTCTTCTACGGCTTTCTTCTTCTTTCTCGTCAACGTCTCCTTACTTTTCACCCTCTCTTCCGCTGCGGATCCATTTGTTTCCTACAATTTTGAGGTCTCTTACATCACTGCCTCTCCACTTGGAGTTCCTCAGCAGGTCATTGCTATCAACAACAAATTCCCGGGTCCTACTATCAATGTGACCACAAACAACAATGTTGCCGTCAATGTTCGGAACAAATTGGATGAAAGCCTCCTCATTCATTGGTCTGGGATTCAGCAGAGGAGGAGTTCGTGGCAAGATGGTGTTCTTGGCACGAATTGTCCCATTCCTTCTAAGTGGAATTGGACTTACCAGTTTCAGGTCAAGGATCAAATTGGAAGCTTTTTCTACTTCCCTTCCCTTCATCTTCAGAGGGCTGCTGGTGGATTTGGGGGTTTCATTATAAACAACCGACCCATCATTTCTCTTCCTTTTGATACCCCATATGGGGACATTGTCCTTTTTATTGGAGATTGGTACACCCGCAACCATACGGACATGAGGAAGGCCCTAGACGATGGAAAAGATCTTGGCATGCCGGATGGTGTACTCATCAATGGGAAAGGCCCATACCGATATAACGATACACTTGTTCCTGATGGCATCGATTATGAAACAATTGAAGTCCATCCTGGAAAAACTTACCGACTTCGTGTACATAATGTTGGAGTATCAACAAGTCTGAATTTCAGGATCCAGAGTCATAACTTACTTCTAGCAGAGACAGAGGGGTCTTACACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGGCAATCTTATTCTTTTCTGGTAACCACGGACCAAAATGCAAGTTCAGATTACTACATTGTAGCAAGTGCCAGGTTTGTGAATGAATCACGTTGGCAAAAAGTTACTGGAGTTGCTATCTTGCGGTATACAAATTCCAAGGGGAAGGCGCATGGTCCTCTTCCACCGGCTCCTGATGATCAATTTGACAAAACTTACTCAATGAACCAAGCAAGATCCATCAGATGGAATGTATCAGCAAGTGGTGCTCGTCCTAACCCACAAGGGTCTTTCAGATATGGTTCCATCAATGTGACTGAGATTTATGTATTAAAAAATAAGCTACCTGAGAAAATTAATGGGAAGAGGCGAGCAACTGTCAGTGGAATATCTTTTGTCAATCCTTCGACTCCAATCAGGCTTGCTGACCAGTACAAATTGAAGGGAGTATACAATCTAAATTTCCCCACCAAGCCTATTACTGGATCACCTCGTGCAGAAACATCAATCATTAATGGAACCTATAGAGGATTTATGGAAGTTATATTGCAGAACAATGATACCAAGATGCATACCTATCACATGAGTGGATATGCATTTTTTGTAGTCGGGATGGATTTTGGTGATTGGTCTGAGAATAGCAGGGGCACATATAACAAGTGGGATGGAATAGCTCGCACTACAGCTCAGGTTTACCCTGGAGCATGGACTGCAATTTTGGTTTCCCTTGACAACGTAGGAGTATGGAATCTCAGAACAGAAAACCTTGATTCATGGTACCTTGGTCAGGAAACATATGTCAGGGTTGTCAACCCAGAGGTTACCAACAAGACTGAGCTGCCCATTCCAGATAACGCCCTCTTCTGTGGCGCCTTAAGTAAATTGCAGAAGCCTCAAGTTATTGCTTCTGCGGCATCACCAATCAATGGGAATACGCTGAAGCTGTTTTTCACCTGGCTGATTGTATGCGCCTGGATCCATGTATTCCAGTAA 1776 0.4352 MSSSTAFFFFLVNVSLLFTLSSAADPFVSYNFEVSYITASPLGVPQQVIAINNKFPGPTINVTTNNNVAVNVRNKLDESLLIHWSGIQQRRSSWQDGVLGTNCPIPSKWNWTYQFQVKDQIGSFFYFPSLHLQRAAGGFGGFIINNRPIISLPFDTPYGDIVLFIGDWYTRNHTDMRKALDDGKDLGMPDGVLINGKGPYRYNDTLVPDGIDYETIEVHPGKTYRLRVHNVGVSTSLNFRIQSHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTTDQNASSDYYIVASARFVNESRWQKVTGVAILRYTNSKGKAHGPLPPAPDDQFDKTYSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKLPEKINGKRRATVSGISFVNPSTPIRLADQYKLKGVYNLNFPTKPITGSPRAETSIINGTYRGFMEVILQNNDTKMHTYHMSGYAFFVVGMDFGDWSENSRGTYNKWDGIARTTAQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRVVNPEVTNKTELPIPDNALFCGALSKLQKPQVIASAASPINGNTLKLFFTWLIVCAWIHVFQ 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01384 591 Pfam Multicopper oxidase 160 313 IPR001117 -
Vian1g01384 591 FunFam Monocopper oxidase-like protein SKU5 22 146 - -
Vian1g01384 591 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Vian1g01384 591 SUPERFAMILY Cupredoxins 376 551 IPR008972 -
Vian1g01384 591 Gene3D - 18 146 IPR008972 -
Vian1g01384 591 FunFam Monocopper oxidase-like protein 363 561 - -
Vian1g01384 591 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Vian1g01384 591 Gene3D - 158 351 IPR008972 -
Vian1g01384 591 Gene3D - 363 561 IPR008972 -
Vian1g01384 591 SUPERFAMILY Cupredoxins 23 174 IPR008972 -
Vian1g01384 591 PANTHER MULTI-COPPER OXIDASE 46 530 IPR045087 -
Vian1g01384 591 FunFam Monocopper oxidase-like protein 158 351 - -
Vian1g01384 591 Pfam Multicopper oxidase 402 533 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01384 Vian-Chr1 15146581 15150357 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01384 - - gmx:100788318 1113.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01384 1 15146581 15150357 Vian1g01384 1 15146581 15150357 ECH