Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01333 ATGTTCACGGCTAGCAAACTAGCCTTCATATTAACACTCCCTCGTCCATGCTCTGCACCCTTCACACCAATCTCTTCCTTATCTCCTTCTTCTTCTTCTCCTTCTGGTCTCCACCTCATTCACTTCAATGGACGCCACTTATGCCTCCGCCGCAGACTATTTTTACTTTCTCCTAAGGCCACAGCAGATCAACAAGGCAAGGTTACTGAATTTGAAGAGGATGGAAACATTGTTGATGGTAAAATCCTCCCTTATTGTAGCATAGACAGAAAAGAGAAGAAATCAATTGGTGAACTTGAGCAGGAGTTTCTTCAGGCACTACAAGCATTCTATTATGAGGGAAAGGCTATCATGTCTAATGAAGAATTTGATAATCTTAAGGAAGAACTCATGTGGGAAGGGAGCAGCGTTGTCATGCTAAGTTCTGATGAGCAAAAGTTCCTGGAAGCTTCTATGGCCTATGTGTCTGGAAATCCAATTATGAATGACAAAGAGTTTGATGAGTTGAAACTGAGGCTAAAGATAGAAGGGAGTGAAATTGTGGCTGAGGGTCCAAGGTGCAGTCTTCGTAGTAGAAAGGTTTACAGTGACCTATCAGTTGATTATTTAAAGATGCTCCTGCTGAACGTCCCAGCTACAGTGATTGCATTAGGACTGTTCTTCTTCCTTGATGATCTGACTGGATTTGAGATCACATATTTGCTAGAGCTGCCAGAGCCTTTTAGTTTCATTTTCACCTGGTTTGCTGCTGTTCCTCTCATTGTGTGGATAGCTCTGACACTAACCAATGCCATTGTAAAAGACTTTGTGATTTTAAAGGGTCCTTGTCCGAACTGCGGAACTGAAAATACCTCTTTCTTTGGGACTATACTGTCAATTTCGAATGGTGGTTCCACAAACACTGTCAAATGCTCAAACTGCGGCACTGCAATGGAATATGATTCAACTACAAGATTGATTACATTACCAGAAGGAAGTAACGCCTAA 987 0.4195 MFTASKLAFILTLPRPCSAPFTPISSLSPSSSSPSGLHLIHFNGRHLCLRRRLFLLSPKATADQQGKVTEFEEDGNIVDGKILPYCSIDRKEKKSIGELEQEFLQALQAFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPIMNDKEFDELKLRLKIEGSEIVAEGPRCSLRSRKVYSDLSVDYLKMLLLNVPATVIALGLFFFLDDLTGFEITYLLELPEPFSFIFTWFAAVPLIVWIALTLTNAIVKDFVILKGPCPNCGTENTSFFGTILSISNGGSTNTVKCSNCGTAMEYDSTTRLITLPEGSNA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01333 328 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 11 318 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01333 Vian-Chr1 14468399 14471060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01333 - - gmx:100784314 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01333 1 14468399 14471060 Vian1g01333 1 14468399 14471060 ECH
Vian1g01333 1 14468399 14471060 Vian10g00317 10 2899567 2902022 PCT