LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian1g01328	ATGGGCTTCCCAGCCAACGGCGCCTCAGCGGACCACCCCATCAAGTTCCTTATCTACGGCCGTACGGGCTGGATTGGTGGTCTCCTCGGCACCCTCTGCCAGGCCCAAGCCATCCCCTTCCAGTACGCCTCGGGCCGTCTCGAGGACCGGGCCTCCCTCGAAAAGGACATAGCTGAGGTCAAGCCCACCCACGTATTCAACGCCGCCGGTGTCACGGGCCGGCCGAACGTGGACTGGTGCGAGTCCCACAAGGTCGAAACCATCCGAACCAACGTCGTCGGAACCCTCACTCTCGCCGACGTCTGCCGCCAACACGGCCTTCTCCTCCTCAACTACGCCACCGGTTGCATCTTCGAGTACGATTCCGGTCATCCTCTCGGATCCGGAATCGGCTTCAAAGAGAACGACACTCCCAATTTCACCGGTTCCTTCTACTCTAAGACCAAGGCCATGGTGGAGGATCTGCTTAAGAACTACGATAATGTGTGTACCTTGCGAGTGAGGATGCCTATCTCGTCTGATTTATCGAATCCGCGCAACTTCATCACGAAGATCACTCGATACGAGAAAGTTGTGGATATTCCGAATTCCATGACTATATTGGATGAACTTCTTCCCATTTCGATTGAGATGGCGAAGAGGAATCTGACTGGGATCTGGAACTTCACAAACCCTGGAGTGGTTAGTCACAATGAAATTCTAGAGATGTACAGAGAGTATGTTGACCCGAACTTCACCTGGAAGAACTTCACTCTTGAGGAACAGGCGAAGGTGATTGTTGCTCCCAGGAGCAACAATGAGCTTGATGCCACCAAATTGAAGACTGAATTTCCAGAATTGCTGTCTATCAAGGACTCCCTCGTCAAGTATGTCTTCCAGCCTAACCAGAAGGTTAAAGCTTAA	903	0.5271	MGFPANGASADHPIKFLIYGRTGWIGGLLGTLCQAQAIPFQYASGRLEDRASLEKDIAEVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRQHGLLLLNYATGCIFEYDSGHPLGSGIGFKENDTPNFTGSFYSKTKAMVEDLLKNYDNVCTLRVRMPISSDLSNPRNFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYREYVDPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELLSIKDSLVKYVFQPNQKVKA	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian1g01328	300	CDD	dTDP_HR_like_SDR_e	15	287	-	-
	Vian1g01328	300	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	13	291	IPR036291	-
	Vian1g01328	300	Gene3D	-	6	300	-	-
	Vian1g01328	300	FunFam	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase	5	300	-	-
	Vian1g01328	300	PANTHER	DTDP-4-DEHYDRORHAMNOSE REDUCTASE	15	297	IPR005913	-
	Vian1g01328	300	Pfam	RmlD substrate binding domain	15	187	IPR029903	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian1g01328	Vian-Chr1	14396361	14397352	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian1g01328	K12451		-	gmx:100781643	560.836

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vian1g01328	1	14396361	14397352	Vian1g01328	1	14396361	14397352	ECH