Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01318 ATGCGCCAGTTATCACCCACCTCAACTTTCTGTGAAAGGAATGAGGGCCACCCAAAGATATCGAATCCCCAATTACAGGTTGAGACCAACATGTGCACCAGTTTGATCCCCAAATCCCCAACATGTCCACAACATCATCACCAACCACAAAATCCCAACGAAACCCATTGGTCCCTGGCCCTCCTCGAAGCCAAGTGTATTTCCAACATATCCTTCTCCATGATCCTAACTGGTCTATTACTCTATTCTCGCTCCATGATCTCCATGATCTTCCTTGGCCACCTCGGAGAACTCGCTCTCGCAGGTGGCTCCTTAGCCATCGGATTCGCCAACATCACTGGCTACTCTGTTCTCTCTGGCCTCGCCATGGGAATGGAACCCATCTGCGGTCAGGCCTTCGGAGCCAAAAGGTTCAAACTTCTCGGCCTCACCATGCAGAGAACCGTTCTCCTTCTTCTCCTAACTTCACTTTTCATCTCATTCTTCTGGCTCAACATCAAGAAACTATTACTCCTATGTGGCCAAGAAGAAGACATAGCCAATGAGGCGCAATTCTATATATATTACTCTCTCCCAGATCTTATATTACAATCGCTGCTGCACCCTCTAAGAATCTATCTTCGAAGCCAATCAATAACTCTTCCTCTCACGTGCTGCGCCGCTCTCTCCATTATCCTCCACGTGCCCATCAACTACCTCTTTGTCTCCGTCCTCAACCTCGGAATCGGAGGCATCGCGTTAAGCGCCGTGATCACCAATTTCAACCTCGTCGCGTCGTTGGTTATTTACGTTGTGGTATCAGGCACGCACAAGAAAACGTGGCCGGGTATTTCCAGCTCGTGCTTCAAGGGGTGGAAAAGGCTCCTGAATCTCGCGATTCCGAGTTGCGTGTCGGTTTGTCTGGAATGGTGGTGGTACGAGATAATGATTTTACTGTGCGGGTTGTTAGTGAACCCTCATGCAAGTGTTGCCTCCATGGGGGTTTTAATTCAAACCACGGCTTTGATATACATTTTTCCGTCGTCTTTAAGTTTTGGAGTGTCGACGCGTGTTGGAAACGAGTTGGGTGCGGGGAATCCTGTGAGGGCGAAAATTGCGGCGCTGGTTGGACTCTGTTTCAGTTTCGTATTGGGGTTCTCTGCGTTGGCGTTCGCGATTTCGGTGAGGAAGGTTTGGGCGACGATGTTCACGGGGGACGGAGAAATCCTTGCTTTGACGTCGATGGTGTTGCCTATCATTGGGCTTTGCGAGCTCGGGAACTGTCCCCAGACGACGGTTTGCGGGGTTTTGAGGGGGACAGCGAGGCCGAAATTGGGGGCAAACATAAACTTGGGTTGCTTCTACCTAGTGGGCATGCCGGTTGCGGTGTGGTTGGGGTTCTTTGCAGGGTTTGACTTCAAAGGGTTGTGGCTGGGGATGTTGGCGGCGCAGGGGTCTTGTATGATCACAATGATGTTCGTGTTGGCGCGGACCAATTGGGAGGGACAAGCTTTGAGAGCTAAGGAACTCACTTCATGTGATTCTAACGAGGAGAAAAAACTGGTGGAGGAGGAAGAAGAGAAAGAGCTAGAGCAAGAAGTTGAGGAAGGTTTTTTGGGATCATGTGCCACCAAAGAATCATCTGAGTTAGTTGTTTGA 1638 0.5 MRQLSPTSTFCERNEGHPKISNPQLQVETNMCTSLIPKSPTCPQHHHQPQNPNETHWSLALLEAKCISNISFSMILTGLLLYSRSMISMIFLGHLGELALAGGSLAIGFANITGYSVLSGLAMGMEPICGQAFGAKRFKLLGLTMQRTVLLLLLTSLFISFFWLNIKKLLLLCGQEEDIANEAQFYIYYSLPDLILQSLLHPLRIYLRSQSITLPLTCCAALSIILHVPINYLFVSVLNLGIGGIALSAVITNFNLVASLVIYVVVSGTHKKTWPGISSSCFKGWKRLLNLAIPSCVSVCLEWWWYEIMILLCGLLVNPHASVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAGNPVRAKIAALVGLCFSFVLGFSALAFAISVRKVWATMFTGDGEILALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLGFFAGFDFKGLWLGMLAAQGSCMITMMFVLARTNWEGQALRAKELTSCDSNEEKKLVEEEEEKELEQEVEEGFLGSCATKESSELVV 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01318 545 MobiDBLite consensus disorder prediction 509 528 - -
Vian1g01318 545 Coils Coil 506 529 - -
Vian1g01318 545 PANTHER MULTIDRUG RESISTANCE PROTEIN 57 493 - -
Vian1g01318 545 NCBIfam MATE family efflux transporter 75 470 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian1g01318 545 Pfam MatE 294 457 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian1g01318 545 Pfam MatE 74 233 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian1g01318 545 CDD MATE_eukaryotic 63 497 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01318 Vian-Chr1 14258559 14260196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01318 K03327 - gmx:100778250 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01318 1 14258559 14260196 Vian1g01318 1 14258559 14260196 ECH