Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01304 ATGGAGGTCGAACTCAAACAGTTGAACGCCGATCTTCAATTTCTGAGTCAATCGCTTCCCGATCCATCTCACCATGCTTTGCTCGACAAGATTCAATTGCGTGTTGAGGAACTTGGCAAGCTTGCAGCGGCTGCACCTGTTCGACGCTCCAAAGTCGAGGATATGAGTGCTGAGGTTGTAGATAGCAATCCTTATAGTCGGCTTATGGCACTTCAGAGAATGGGTATTGTGGAGAACTATGAAAGAATACGCGATTTCTCCGTTGCCATAGTTGGGATAGGTGGTGTAGGAAGTGTTGCAGCTGAGATGCTGACTAGATGCGGCATAGGTCGACTTTTGTTGTATGATTATGACAAAGTGGAGCTTGCAAACATGAATAGGTTGTTCTTTCGTCCAGATCAGGTTGGTTTGACTAAGACAGATGCAGCTGTACAGACTCTTTCAGACATAAACCCTGATGTTGTACTAGAGAGCTATACACTGAATATCACAACCGTCACAGGTTTTGAAACCTTTATGTCAAGTTTGAAAAAAAAATCATTTTGCCCAAATAAAGAAGGGAGTGGCGTGGATCTGGTTTTAAGTTGTGTGGATAATTACGAAGCAAGAATGGCTGTTAACCAGGCCTGTAATGAATTGAGTCAAACATGGATGGAGTCAGGTGTTTCTGAGGATGCTGTTTCTGGCCATATTCAATTACTTATTCCTGGTGAAACTGCCTGTTTTGCTTGTGCCCCTCCTCTGGTTGTTGCATCTGGGGTAGATGAACGCACACTCAAGCGTGAAGGGGTCTGTGCTGCCTCTTTACCCACCACTATGGGGGTTGTTGCTGGCCTTCTAGTCCAAAACACACTAAAATTATTGTTAGGCTTTGGACAAGTCTCTCCATATTTGGGATATAATTCTCTAAAGGATTTTTTTCCAACTATGCAAATGAAGCCAAACCCTCAATGTTCAAATGTTGCTTGCTTGAAAAGACAGGAAGAATACATGCTTGCAAAACCAGCAAGAGATGCTGCAGCCAAAGCAAAAATGGAAGCTGAAGTACTATCAACTGAGGAAGTGCCACTTCACGACGATAATGAATGGAATATAAGTGTTGTTGATGATGTTGAGCTGGATGGTCCGGATACCAGAAGTTCAGATGTTCTGCCGGAAGGTCTCACACATGAACTTCCTAGTGCAGACGAGTTTCATGAGGCAACTCCTGACGCTCCAGTAGCTGACAATGACGACCTTGAAGATCTTCGTAGGCAACTTGAAGCCATTAATTCTGCATAG 1281 0.4387 MEVELKQLNADLQFLSQSLPDPSHHALLDKIQLRVEELGKLAAAAPVRRSKVEDMSAEVVDSNPYSRLMALQRMGIVENYERIRDFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGLTKTDAAVQTLSDINPDVVLESYTLNITTVTGFETFMSSLKKKSFCPNKEGSGVDLVLSCVDNYEARMAVNQACNELSQTWMESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGVDERTLKREGVCAASLPTTMGVVAGLLVQNTLKLLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNVACLKRQEEYMLAKPARDAAAKAKMEAEVLSTEEVPLHDDNEWNISVVDDVELDGPDTRSSDVLPEGLTHELPSADEFHEATPDAPVADNDDLEDLRRQLEAINSA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01304 426 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 47 419 IPR045886 -
Vian1g01304 426 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 60 324 IPR035985 GO:0008641
Vian1g01304 426 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
Vian1g01304 426 CDD ThiF_MoeB_HesA_family 64 312 - -
Vian1g01304 426 Gene3D - 82 344 - -
Vian1g01304 426 Pfam ThiF family 65 319 IPR000594 -
Vian1g01304 426 FunFam Putative ubiquitin-like modifier-activating enzyme 5 82 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01304 Vian-Chr1 14070098 14075635 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01304 60 175 EF-hand Containing Proteins AT2G30110 33.613 1.80e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01304 K12164 - gmx:100819760 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01304 1 14070098 14075635 Vian1g01304 1 14070098 14075635 ECH