Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01276 ATGTTACCTCCCGTTCCTGTTCCTATTGCTATTGATATCAACGCTATAAAAGATAAGCTCTCCTTTCAGTTGCGACCTTTGCAACGTTCTTTCCAATTCTGGGTTCGAGCCATTGACATTTACACCGGATACAAGGTGTTTCAAGTGAGAGTCAATTTCGTCAAAGATGTGCAGAAGCAGGAAGCAATGTGGGAACGACAGCACGAGCTTGCTGCCGATAAGATTTTTGCCTTGTGCTCTGACCTCGGTGGTTTCTTCCTCAAGATTGCCCAAATTATAGGGAAGCCTGATTTGGCTCCGGCTGCATGGGTGAAAAGACTTGTTACGCTGTGTGATAGGGCTCCTCCTACCCCTTTTGATGTGATGAAACTAGTTTTGGAGAACGAGCTGGAACAGGGTATTGATGATGTGTTCGAGAGGTTCGATGTTGAACCCCTAGGTTCTGCTTCCATTGCTCAGGTTCATAGAGCAAGACTGAAAGGTGATACAAGTGATGTTGTCGTCAAGGTTCAACATCCAGGAATTCAGGATCTGATGATGACAGATATCCATAACTTGCAAGCGTTTGCACTGTACATGCAAAAGACAGATATCAAATTTGATCTATATTCAGTGACTAAGGAGATGGAAAAACAGATTGGATATGAATTTGATTTCATGAGGGAGGCTGATGCGATGGTAAAGATAAGAAAGTTCTTGTATGAGAATAACAAAAAGACTCCTGTTTTGGTGCCACGAGTAATACGCGATATGGTTACCAGGAGGGTCCTAGTCATGGAATATATTGATGGGGTTCCAATAATGAACCTTGGTGATGAAATAGCAAAGAGAGGCATAAATCCTCGTGGTAAGGTTGCGGCAGCAGCAAAGCAGAAAATTCTTCAAAGCTTGACTCTAGCATATGGTCAAATGATTTTAAAAAGTGGATTCTTCCATGCAGATCCTCATCCAGGGAACATCCTGATTTGTAAAGGATCAGAGGTTGCCTTGCTAGACTACGGGCAGGTGAAGGATCTCCCGGAACAGTTGAGGCTTGGCTATGCTAATCTAGTTCTTGCAATTGCCAATCGGGACCCATTAAGAGCTGCAGAGAGCTATAGGGAACTTGGTATAGAAACCTTGAGCAGTTGTGAAAATGGGCTACAAGAATTGTTTAGACTAGCAGAGACAATGTTTGATACAAAATTGCCTCCTGGGGTTGTAATGCTGCAACCTTTCTCAGATGAATCTTCAATTAAAAAAGTTGCTGTTCAGTCCTTTCCAGAAGAACTTTTTTCTGTACTTCGGACAGTGCATCTACTGAGGGGACTTAGCGTTGGACTTGGAATCAATTATTCTTGTGCAGAACAGTGGAGGCCCTTTGCAGAAGAAGCTTTGTCCCAAGCTGGCAGATTAAAAGATAAGAGTGGTAAGAGCAGAGGCAGATAA 1428 0.4307 MLPPVPVPIAIDINAIKDKLSFQLRPLQRSFQFWVRAIDIYTGYKVFQVRVNFVKDVQKQEAMWERQHELAADKIFALCSDLGGFFLKIAQIIGKPDLAPAAWVKRLVTLCDRAPPTPFDVMKLVLENELEQGIDDVFERFDVEPLGSASIAQVHRARLKGDTSDVVVKVQHPGIQDLMMTDIHNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFMREADAMVKIRKFLYENNKKTPVLVPRVIRDMVTRRVLVMEYIDGVPIMNLGDEIAKRGINPRGKVAAAAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPEQLRLGYANLVLAIANRDPLRAAESYRELGIETLSSCENGLQELFRLAETMFDTKLPPGVVMLQPFSDESSIKKVAVQSFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPFAEEALSQAGRLKDKSGKSRGR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01276 475 CDD ABC1_ADCK3-like 110 365 - -
Vian1g01276 475 Pfam ABC1 atypical kinase-like domain 110 364 IPR004147 -
Vian1g01276 475 Gene3D Transferase(Phosphotransferase) domain 1 136 349 - -
Vian1g01276 475 PANTHER ABC1 FAMILY PROTEIN 24 460 - -
Vian1g01276 475 ProSiteProfiles Protein kinase domain profile. 140 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g01276 475 SUPERFAMILY Protein kinase-like (PK-like) 112 338 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01276 Vian-Chr1 13781266 13789069 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01276 K08869 - gmx:100813009 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01276 1 13781266 13789069 Vian1g01276 1 13781266 13789069 ECH