Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01264 ATGGAAATGAAAAAGGTTTTGTGGGCTGTTTTATTGTTTGGTTTTGTTCTTGGAATGGGCGAGAGTTTTGATTTCAACGAGAAGGAGCTAGAATCGGAACAAGGGTTGTGGGATTTGTACGAGAGATGGAGAAGCCACCACACGGTTTCACGAAGCTTCGATGAGAAGCAGAAGCGCTTCAACGTGTTCAAAGCCAACGTGATGAATGTCCACAACGCGAATAAAATGGACAAGCCTTACAAGCTGAAGTTGAACAGGTTTGCTGACATGACCAACTATGAATTCACGACCATCTATGCTAACTCCAAGGTGAGTCATCATAGAATGTTCCAAGGCATGCCACGTGAGAATGGTAGTTTCATGTATGAGAACGTTGATAGGGTTCCTTCTTCGGTGGATTGGAGGAAGAAAGGTGCTGTCACTGATGTAAAGGATCAAGGCAAATGTGAAAGCAATTACCCTTATGTAGCAAGAGATGGAATTTGTGATGCATCAAAGGTGGAGCAACCTGCTGTGTCAATTGATGGGTATGAAACTGTCCCCAGTAACGATGAAGCTGCATTGCTCCAAGCTGTTGCCCATCAACCTGTATCAGTAGCCATTGATGCTGGCGGATATGACTTTCAGTTCTACTCAGAGGGAGTGTTTACGGGATTTTGTGGCACCGGTCTGAATCATGGGGTAACAATTGTGGGGTATGGAACAACACAAGATGGAACAAAATATTGGACAGTGAAGAACTCGTGGGGATCCGAATGGGGAGAAAATGGCTATATCAGAATGCAAAGAGACTTAGATCTGTGTGGCATAGCAATGGAGGCTTCCTATCCAATCAAAAACTTCTCCTCCAAACCTTCTTCGTTTCTCAAGGACGAGCTTTGA 882 0.4433 MEMKKVLWAVLLFGFVLGMGESFDFNEKELESEQGLWDLYERWRSHHTVSRSFDEKQKRFNVFKANVMNVHNANKMDKPYKLKLNRFADMTNYEFTTIYANSKVSHHRMFQGMPRENGSFMYENVDRVPSSVDWRKKGAVTDVKDQGKCESNYPYVARDGICDASKVEQPAVSIDGYETVPSNDEAALLQAVAHQPVSVAIDAGGYDFQFYSEGVFTGFCGTGLNHGVTIVGYGTTQDGTKYWTVKNSWGSEWGENGYIRMQRDLDLCGIAMEASYPIKNFSSKPSSFLKDEL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01264 293 SMART pept_c1 128 278 IPR000668 GO:0006508|GO:0008234
Vian1g01264 293 Pfam Papain family cysteine protease 150 278 IPR000668 GO:0006508|GO:0008234
Vian1g01264 293 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 242 261 IPR025661 -
Vian1g01264 293 SUPERFAMILY Cysteine proteinases 37 271 IPR038765 -
Vian1g01264 293 SMART Inhibitor_I29_2 40 95 IPR013201 -
Vian1g01264 293 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 224 234 IPR025660 -
Vian1g01264 293 Gene3D Cysteine proteinases 152 280 - -
Vian1g01264 293 Gene3D Cysteine proteinases 17 151 - -
Vian1g01264 293 Pfam Cathepsin propeptide inhibitor domain (I29) 40 95 IPR013201 -
Vian1g01264 293 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 33 151 IPR013128 GO:0008234
Vian1g01264 293 CDD Peptidase_C1A 129 277 IPR039417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01264 Vian-Chr1 13650003 13651552 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01264 K16292 - gmx:100806581 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01264 1 13650003 13651552 Vian1g01264 1 13650003 13651552 ECH