Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01244 ATGGACTTCGACTTCAGGGCTAGTTTTCATTCTGTCAAACACCTTTCTGCTGTGCAAGCTGCTAGACTTCACTCTGATAACTATTCAGTGATCCATTACACGGATGTGGATAATGACGGCCTGTGCAATTTCCGATGTCCTTTTTGTGATTTTGAAATTGAAGTTCCTCTACTCTGCACCAATTTGGAAGAGGATCATTGCTATGCCCTACAAAATGTGGTTTGTCCCGTGTGTGAAGAAAATTTAGGGAAGGATTCAATCGTGCAATTTACACATTCAAACTCTCGAAAGTGGGCGTGGAAGCCTGAGAAATCTAGCATCTGGTCTGGTAACGCAGCAATGCTAGGTAAGAAGCTGGCTACCAGGGGGAACAAACAAGAATCAATAACTGATCCACTTTTGACACCATTCATCTGCAACCCTGTTCCAAACTTAAACAATCTCCATCCAGATGAAAACTCCAGCTCCAGCAGCAAGGATATAAACATTCCTGATGCAAAAAGCAGGTCTGGCAAAGATGAAGCAGTTGTAGGTGATGAGCAGGATCAGGAAGAGAAAAGGCTGAGGGCAGCTTTTGTTCAGCAGTTGATATTCTCAACTATATTGGAGTAA 612 0.4297 MDFDFRASFHSVKHLSAVQAARLHSDNYSVIHYTDVDNDGLCNFRCPFCDFEIEVPLLCTNLEEDHCYALQNVVCPVCEENLGKDSIVQFTHSNSRKWAWKPEKSSIWSGNAAMLGKKLATRGNKQESITDPLLTPFICNPVPNLNNLHPDENSSSSSKDINIPDAKSRSGKDEAVVGDEQDQEEKRLRAAFVQQLIFSTILE 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01244 203 MobiDBLite consensus disorder prediction 148 184 - -
Vian1g01244 203 MobiDBLite consensus disorder prediction 165 184 - -
Vian1g01244 203 PANTHER PROTEIN DEHYDRATION-INDUCED 19 35 202 IPR033347 -
Vian1g01244 203 Pfam Drought induced 19 protein (Di19), zinc-binding 43 92 IPR008598 -
Vian1g01244 203 MobiDBLite consensus disorder prediction 148 164 - -
Vian1g01244 203 Pfam Stress-induced protein Di19, C-terminal 123 201 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01244 Vian-Chr1 13457182 13461599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01244 - - vun:114175178 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01244 1 13457182 13461599 Vian1g01244 1 13457182 13461599 ECH
Vian1g01244 1 13457182 13461599 Vian4g00906 4 12857287 12861640 PCT