Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01218 ATGAAGAAGGGAATAACACTACTAACCATAACAGTGATCGCGATATGTTTGGCTATGGTTAGCAGTGCGCCGGAGTCCCCACCATACACTGTGGTACACTCGCAGTCCGATTTCGAGATCAGGCTCTATGGAACCTCCGTTTGGATGTCTGCTCCCGCTCTCGACATTTCCTTCGAGAAAGCCTCCTGGGACGGTTTTCACAGGTTGTTCCAGTTTACTGAAGGCGCCAACCTCAATTTCTCACGAATCCCAATGACCGTTCCCGTCTTGACCACCACCGTTCCCGGAGCCGGTCCCCTCAAGTCCCAAGGCTACTACGTTAGTTTATACTTACCCGTTAAGTTCCAAGGAAACCCACCCCTGCCGCTTCCAGAACTCAATATCAGGCCCTATGAATTCACCACCCACTGCGTTGCGGTTAGAAAGTTCTCTGGATTCGCCAATGATGAGAGGATTGTCAAGGAGGCGGAAAAGCTTGCCACCAGCCTCAGTCGCTCTCCCTGGGCGCAGTCCAAGACTCGCCGTGGTTACTCGATCGCGCAGTACAATACTCCCATCCGAATTGTGAATCGCAAAAACGAGGTCTGGGTGGACATTGATGCTCCTCAATTAGGCTGTGAATCGGTTGGTCTGTCTGATGTGTGA 645 0.5178 MKKGITLLTITVIAICLAMVSSAPESPPYTVVHSQSDFEIRLYGTSVWMSAPALDISFEKASWDGFHRLFQFTEGANLNFSRIPMTVPVLTTTVPGAGPLKSQGYYVSLYLPVKFQGNPPLPLPELNIRPYEFTTHCVAVRKFSGFANDERIVKEAEKLATSLSRSPWAQSKTRRGYSIAQYNTPIRIVNRKNEVWVDIDAPQLGCESVGLSDV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01218 214 FunFam Heme-binding protein 2 24 204 - -
Vian1g01218 214 Gene3D Regulatory factor, effector binding domain 24 203 IPR011256 -
Vian1g01218 214 PANTHER HEME-BINDING PROTEIN-RELATED 22 198 IPR006917 -
Vian1g01218 214 SUPERFAMILY Probable bacterial effector-binding domain 15 199 IPR011256 -
Vian1g01218 214 Pfam SOUL heme-binding protein 25 197 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01218 Vian-Chr1 13096260 13097055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01218 - - gmx:100306073 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01218 1 13096260 13097055 Vian1g01218 1 13096260 13097055 ECH