Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01216 ATGACTTCAAGCATGTTGAGTGGGGAACGGAGATGGGCCTCCTCTTCCAGAAGAGGTGGTATGACTGTTTTAGGGAAAGTTGCAGTTCCAAAACCTATCAACTTACCTAGTCAGAGGTTAGAAAATCATGGTCTGGACCCAAACGTGGAGATTGTTCCCAAGGGTACACTCAGCTGGGGTAGTAGATCATCATCTTCTACATCTAATGCATGGGGTTCTTCTCTGTCCCCAAAAACTGATGGTGGTGCTAGTTCACCCAGTCACCTCAGTGCCCGTCCATCATCTGGTGGAAGTGGCACACGACCTTCTACTGCTGGCAGTGATAGGGTTCTTGAGCCTACTGCTAATTCATGGGGCACAAATTCTCGGCCTTCATCAGCATCTGGGGTACTGTCAAAAACTCAGTCTTCATTGACATCATTGCGTCCTCGGAGTGCAGAAACTAGACCTGGAAGCTCTCAGCTATCTCGATTTGCTGAACCCTTGACTGAAAATTCAGGTGCCTGGAATGCTGCTAGGACTACAGAAAAACTGGGTGTTGCACAACCCAAGAATGAAGAATTTTCTCTAAGCTCTGGAGACTTTCCAACCCTTGGTTCTGATAAAGATAAGTCTGTTCTGAATTCTGAGCTGCAAGACCAAAATTCTCAAGCTCACCCTGACTCCTCTTCTGAACTCAGGAAAGAGATAAATGAGACTCCTGTTATTGAAGATGATCATGTAAATGCAAATATTAAGGGTGAAAGTGTAAATTCTTGGAGGAGAGATTATCAGGTTTATAATGAGGAAGGTGTGAGGCCAGGCATAGAGAAATGGCAGGGAAACTCTCAGCTTTATCCTAATGCTGGTATTCCTCCTCAACACTATGAAGCTTGGCATGGTCCTCCGGTAAATAACCCTCAGGGCTGTGTTTGGTTCAGGGGTCCTCCCAGTGGTCCCCCATTTGGAAATCCTGTTACTCCAAGTGGCTTTCCAATGGAACCATTTCCATATTACCGTCCACACATGCCCCCTGCTGGTCTTGCAAACCCTCCCCCAGTTCCCCCCTCTGGAGCTGGACCACGAGGGCACCATAAGAATGGAGATGTCTACAGGCCTCATATAGCCGATGCCTTTATTCGTCCAGGCATTCCTATGAGACCTGGGTTTTATCCCGGTTCAATGGCTTATGAGGGATATTACAGTCCTCCAATGGGCTATTGCAATGCAAATGAGCGAGATGTTCCTTTCATGGGAATGGCTGCTGGACCTCCTGTCTTTAATAGGTACTCAAATCAAAATCCTCCTGAACCTGGCAATGCACATGGTAGGTCTGCTGGATATGGTAATACTGGGAAGCAATTGACTTCAGAGCAAGTGGAATCTGGCCATCCTCCTGATACTGCTGGACCATACAGAGTTCTTCTTAAGCAGCACCCTGAATCAGATGGGAAAAATAAATCAACAAATTTTGAGGATTCAGAGAAAACCAATGCATTATATGCTGATGGTCGTGGCCAACCTAGAATGACTGTTTGGGAGAATGAGCCGAGATCAAACTACAGAAAGAATGAAGATATGGATCTGAGGACGATTACCCATGGTGAAGTTTCTTCTCAGACTTCAGAGAATAAAGTATCTAGTTCTTCTGTCATTAAGGGCAAATCTCTTGAAAGTTCAGGAAACATAAAACTTGATGATAATTCAGCGAGGAAATTGGAGACTGTTGCCTCAGATATGCTAGAAATCTCCCCTAAACCATCTGCTCCAAAAGATGCCAGTCTAATTCAAAAGATCGAGGGTTTAAATGCAAAGGCTAGGGATAATTCATCTGCTCGAAATAGAGAGGAGCAAAGGAGTAAATTTCATACAAGTAATGCTGCGATAGACCATGTGGAAAATACTGTCGGTGCTGATGTGTTTCCAGCACGTACTCATGCCACAGAAAATATAAATCCTGCCCATCATGAAATGGGCGCTGCTGGTGCTGGAAAGAATTTTGAATCCTTGTCTTCCAGTGGAACTGCCACATCCAGGCAATCTGCTCATGGAATGCAAGGGAGAGGTGATCATCGTAACAAAGGAAGATCAAACAATCTAGATGCTGATGGTTGGCGAAAGAAATCTGTGGTTGAAGATTCTTTAGCCTCATCAGGTGTACAGTTGGAAGCATCTAATGTTCTTGTGGGTGATCATCAAATATCTGTTCAGACCAATGACAGGTCAGGATCCTATAACCAAGCAAGGCACTTTGGAGAATCTGTTCAAACCTGGTCTGATTCTGGTGACAGCCATGCACAGCGTGCCAAAATGAAAGAGTTAGCCAAGCAACGGACTAGACAGCTGCAGGAGGAAGAGGAGGAACGGACAAGAAAGCAAAAGGCTAAAGCTCTTGCTAAGTTGGATGAGTTAAACAAGCGATCTCAAGCAGGAGATGGACCAACTCAGAAAGAGTATATTACAAATCCTCAAATGCAGGAAGAAGAGGATGAATGGACAAGAAAGCAAAAGGCGAATGCTTTTGCAAAGTTGGATGAGTTAAACAAGCAATCTCAAGCAGGTGATGGCTCAACTCAGAAAGAGTATGTGACAAATCCTGCCATCCATAATAAGCCAGAGGAGTTGCAACCTTCTGAGCCAAAAACTACAACTGTCAATTCTGCTGTAAATGAACCCAGCATTAGTAGAGTGGAAAAATCACCAGTCTTGCTTGTCGAACCAACTGTTGAGACACTTAAAAGTTCTATCCATGAGCCTATTCTGAAGCAGAATCAAGTTGTGGCGCTGCATCATGATATTAATAATGCTGATGCTACTAATCCCTTGCATGCTCATAACAATGTTGCCTCAAAGCAGAAGCGAATGAACTATAAACAGAAGCAAAATCTTCCTTTTGAGAAAACATCAAGTGACAAAGTTGTCTCTACCACCTCAACTGCCCTGAAAGTTGAGAATGAGGCAAGGATTGATGTTTCTCTCTCTTCTGGTGGTGTTACAAACGAAATTAGTTCAGTCTGTGGCTCTGACTTACCCATGAATTCAGCTGCTGTGGTTGAGTCTTCAGCAAACCCAAAAAAGAAGAATATTAGGAATAGTAAAAACAAACAGAAACATGACGAAAGTTCAACTCAGGCTGTACTACTAATACCAAAAGAAACCAATCTTTCCAAAAGCTCGGTTGAAGGTGACAAGTCCAAGGCTTCTGACTTTGAGTTAGAACAGGGTGTACTTCAACCGGCGCCCCTATCTAAAGATCCAAATCAGTTTCCAGAGCAACACAGATATTCATCAAATGAGGAATCCCATGGTAGACAGAATAGCCAGTGGAAATCACAGCATTCTCTTAGGATGCCAAGAAATATGCAGACCAATAGACCGGCAGAGAAATCCCATGGGACTGATGCTGTGATGTGGGCACCCGTTAAACCACAGAACAAGAGTGAGATCATGGATGAATTGGTGGATAAAAGTAAAACTGAGGCAGTTAATCCTGTAAAGAATGAGGAGCAGGTGCATAATTCAAAAAATAAGAGGGCAGAAATGGAGAGATATATTCCAAAACCTGTTGCAAAAGAAATGGCTCAGCAAGGAAATATTCTACAGGTAGCTTCATCAAGCAATCAGTCTCTTACTAATGATAGCATTGGGAGAGTTGATTCCGGGTCACAGGGCCCCCAAGTCATTCAGCATACTAATACAGTTGTTGGAAAAGTGGGTTCTGGGATGGAGTCTAAAATTAGAGATGGCAGGCATACTAAGCAGGGAAAAGCACATGGGTCGTGGCGGCAACGAAATATAACTGAATCAACTAATGTGCATGATGAACTGGACCATGATTCAAACTCTGAACCAAATGTTCAGAAACCAACAGAGCATTATCATGATCACAAGTCTGAAGCAAGCTTTGTGAAAGGAGGGCAAACCAAGCACTTCAGTGACACTGGTGAAGTCAATGGTTCTAACAATTCTAACTCTAATGATTCAGCTGCTTGGGCTTCAGGTCCTGTTAAAGATCATGCTGCAACAGGCAGAGGGAGGCGGGCCCCTTTCAGAGGACACAAGGGCGCAGGAGGGAACCGTGAAGTTGATAACAAAAGAAATTCTTGGGAGGCAGACAAAGTTGAAACCCTTATTTCATCTTCTGAGCATGGTCAACCAGATATTGGGATGGCTTCTAAAGAAAATCGAGGTGTGGGTGAACGTTTGATGTCTCAGTGGCAACCTAAATCTCAAGCATCTAGTAATCACAGAGGAAATATATCAAGTGACCAGAATGTTAGCTCGGTAGTTGTTGGAGGTAACAAAATGGATCCCACCCACAGCGGGGAATTTCTTCCAGTGAGCCGGGGCAAGAGTTCCAATGCTCACATCTCACAGCCTTTCTATGATCAACCAGTCTCTGAGAAAAGCAAGGCCGGGGAAGCTCCCCATTTTATTAACCAAGAGGGTAAGAAAGAGAGAAGACATGCTCCGTCAAAAAGGCAACAGTACTCCCCGAATCTGGCTTCTGTTACCTTAATTGAGCAGGCTCCAACAAGTCCAGATCTTTTGCAGGACCAACGCCCATCGTCTGGGTCTGGAAAAAATGTGAATCAAAATCGGTTTCGAAGAGGACATGAATCACATGGAAATTTGAAGCTACCAACCCAGGATAATCGACATTATAATCAACCTACAAACCGGGAGAGGCAGGGCCCAAGCACGCATCAGGAGTATCACGCACTTGGCGCATATGATGATGGCAAATCGGACAACTTTGAAAGACCTAAAAATGGTAGCCATGGTGAAAGAAGATTCAGGGAGAGAGGTCCAACTCATTCACGCCGAGGTGGGGGTAACTCTTATGGACGCCAGGGTGGTTTTGAATCTTATGACTAG 4857 0.4427 MTSSMLSGERRWASSSRRGGMTVLGKVAVPKPINLPSQRLENHGLDPNVEIVPKGTLSWGSRSSSSTSNAWGSSLSPKTDGGASSPSHLSARPSSGGSGTRPSTAGSDRVLEPTANSWGTNSRPSSASGVLSKTQSSLTSLRPRSAETRPGSSQLSRFAEPLTENSGAWNAARTTEKLGVAQPKNEEFSLSSGDFPTLGSDKDKSVLNSELQDQNSQAHPDSSSELRKEINETPVIEDDHVNANIKGESVNSWRRDYQVYNEEGVRPGIEKWQGNSQLYPNAGIPPQHYEAWHGPPVNNPQGCVWFRGPPSGPPFGNPVTPSGFPMEPFPYYRPHMPPAGLANPPPVPPSGAGPRGHHKNGDVYRPHIADAFIRPGIPMRPGFYPGSMAYEGYYSPPMGYCNANERDVPFMGMAAGPPVFNRYSNQNPPEPGNAHGRSAGYGNTGKQLTSEQVESGHPPDTAGPYRVLLKQHPESDGKNKSTNFEDSEKTNALYADGRGQPRMTVWENEPRSNYRKNEDMDLRTITHGEVSSQTSENKVSSSSVIKGKSLESSGNIKLDDNSARKLETVASDMLEISPKPSAPKDASLIQKIEGLNAKARDNSSARNREEQRSKFHTSNAAIDHVENTVGADVFPARTHATENINPAHHEMGAAGAGKNFESLSSSGTATSRQSAHGMQGRGDHRNKGRSNNLDADGWRKKSVVEDSLASSGVQLEASNVLVGDHQISVQTNDRSGSYNQARHFGESVQTWSDSGDSHAQRAKMKELAKQRTRQLQEEEEERTRKQKAKALAKLDELNKRSQAGDGPTQKEYITNPQMQEEEDEWTRKQKANAFAKLDELNKQSQAGDGSTQKEYVTNPAIHNKPEELQPSEPKTTTVNSAVNEPSISRVEKSPVLLVEPTVETLKSSIHEPILKQNQVVALHHDINNADATNPLHAHNNVASKQKRMNYKQKQNLPFEKTSSDKVVSTTSTALKVENEARIDVSLSSGGVTNEISSVCGSDLPMNSAAVVESSANPKKKNIRNSKNKQKHDESSTQAVLLIPKETNLSKSSVEGDKSKASDFELEQGVLQPAPLSKDPNQFPEQHRYSSNEESHGRQNSQWKSQHSLRMPRNMQTNRPAEKSHGTDAVMWAPVKPQNKSEIMDELVDKSKTEAVNPVKNEEQVHNSKNKRAEMERYIPKPVAKEMAQQGNILQVASSSNQSLTNDSIGRVDSGSQGPQVIQHTNTVVGKVGSGMESKIRDGRHTKQGKAHGSWRQRNITESTNVHDELDHDSNSEPNVQKPTEHYHDHKSEASFVKGGQTKHFSDTGEVNGSNNSNSNDSAAWASGPVKDHAATGRGRRAPFRGHKGAGGNREVDNKRNSWEADKVETLISSSEHGQPDIGMASKENRGVGERLMSQWQPKSQASSNHRGNISSDQNVSSVVVGGNKMDPTHSGEFLPVSRGKSSNAHISQPFYDQPVSEKSKAGEAPHFINQEGKKERRHAPSKRQQYSPNLASVTLIEQAPTSPDLLQDQRPSSGSGKNVNQNRFRRGHESHGNLKLPTQDNRHYNQPTNRERQGPSTHQEYHALGAYDDGKSDNFERPKNGSHGERRFRERGPTHSRRGGGNSYGRQGGFESYD 1618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01216 1618 Pfam BAT2 N-terminus 15 137 IPR009738 -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 185 203 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 870 886 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1526 1540 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 340 361 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 421 516 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1199 1219 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 661 677 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1507 1525 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 678 698 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1237 1492 - -
Vian1g01216 1618 Coils Coil 761 800 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1347 1365 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1507 1618 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1094 1122 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1011 1124 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 57 172 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 471 485 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1471 1486 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1568 1600 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 440 456 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 661 698 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1261 1296 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 595 616 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1034 1049 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1397 1427 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 748 824 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1439 1458 - -
Vian1g01216 1618 PANTHER PROTEIN MODIFIER OF SNC1 1 817 1615 IPR038808 -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 602 616 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1298 1324 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1 203 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 758 800 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 861 886 - -
Vian1g01216 1618 MobiDBLite consensus disorder prediction 1541 1558 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01216 - - vun:114177734 2892.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01216 1 13056177 13065634 Vian1g01216 1 13056177 13065634 ECH