Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01210 ATGGGTTCATTGGTGTTTGGAGTGTGGTTTCTCTGGGCAGCATATACAATCCCTCTAAGTTGGTGCCACCCCAACACATGCCGTTCATACTGCGGCAACATAACCATAGACTACCCCTTCGCACTCCAATACGGTTGCGGCCACCCTGGCTTCCGCGATCTTCTTTTCTGCATGAACGAGGTTCTCATGTTCCACGTCAGCTCCGGCTCCTACAGGGTCCTCGAAATCGACTACGCCTACCAGGCCCTCACGCTTCACGAGCCTCACATGTCTACCTGCCACAACCTCGTTCTCGGATCCCGTGGCAACGGCTTCTCTGTCGAACCCTGGCGGGCTCCTTACATGAACCCCGCCGCCGACAACGTCTTCATGCTCATCGCCTGCTCCCCCCGCTCCCCCCTCTTCCAGGGCTTCCCCGGAAAACACCTCCCCTGCCGCAACGTCTCCGGAATGGGCTGCGAGGAGTACCTTTCCTGCCCCGCCTGGGAGATGATGGGCCACAAGAGATCTGGCCCCGCCTCCTTCTTCGGCTCCGGCCCACTTGAGTGCTGTGCCGTTCCCTATCAGGCTATTAGGGAGATTAACCTCACCAAGCTTCAGTGTGAAGGGTATAGCAGTGCTTATAGCGTCGCTCCGCTTAAGGTTGATGGGCCAGGCGGGTGGTCCTACGGGATCCGTGTTAGGTACTCCCTGCAGGGGAATGATGAGTTCTGTGGCGCCTGTGAAGCCACTGGTGGCACCTGTGGCTATGGTTCCGATGGGATTAGACAGGTCTGTATGTGCGGGGACTTCAACTCCACCTCCAACTGTGATTCAGTTGGCATACCGACTATTGACGTATGTGGTATTGTGGATGACGAGCAATCAGATTTCAAAAACGGTGGTCATACAATGAGAGTGAGAGTGAGTTTTGATTTGTATTCCGTGTTCCCCACCTATAGAGGCTTACTCGAACATTATTCAAAAGCGCAGGATGCAGGGTAA 984 0.5518 MGSLVFGVWFLWAAYTIPLSWCHPNTCRSYCGNITIDYPFALQYGCGHPGFRDLLFCMNEVLMFHVSSGSYRVLEIDYAYQALTLHEPHMSTCHNLVLGSRGNGFSVEPWRAPYMNPAADNVFMLIACSPRSPLFQGFPGKHLPCRNVSGMGCEEYLSCPAWEMMGHKRSGPASFFGSGPLECCAVPYQAIREINLTKLQCEGYSSAYSVAPLKVDGPGGWSYGIRVRYSLQGNDEFCGACEATGGTCGYGSDGIRQVCMCGDFNSTSNCDSVGIPTIDVCGIVDDEQSDFKNGGHTMRVRVSFDLYSVFPTYRGLLEHYSKAQDAG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01210 327 Pfam Wall-associated receptor kinase galacturonan-binding 27 85 IPR025287 GO:0030247
Vian1g01210 327 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 18 274 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01210 5 134 Receptor kinase-like Gene Family AT1G21240 29.630 1.54e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01210 - - vra:106753310 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01210 1 13011325 13012852 Vian1g01210 1 13011325 13012852 ECH