Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01178 ATGGTTAACTCCGAAGCAGTAAGAACTGCAGTTGGAATAATTGGAAATGTCATTTCTTTTGGTTTATTCATGTCGCCAGTACCTACATTTATTTCGATATTTAAGGCAAAATCAGTACAAAATTTTAGGTCAGATCCATACATGGCAACCATATTGAACTGTGGTGTGTGGGCATTCTATGGACTGCCCTTCGTAACAAAAGATAACACTCTTGTCATCACAATTAATGGATTTGGCTTCTTCCTTGAAATCTTCTACGCTCTCGTCTTCTTTATTTACTCAACCTGGAGCAAGAGGAGGAAGATCATGCTCATCTTCCTTGGTGAAATGATCTTCCTTGCGTTACTGGTGTTTTTGGTGATGACCTTTGTTCACACCCCCAGCCGAAGAAAGGTGATTGTTGGACCTATCTGCATATTCTTCAACGTCCTTATGTATTTTGCACCCTTGACTGTAATGAGCGTGAAATACATGCCTTTCTTACTTTCATTCGCCAACTTCGCCAATGGAATTGTGTGGACAACCTATGCCTTGCTTAAGTGGGATCCATTCATCGTGATTCCAAATGGTTTGGGAACACTTTCTGGGTTGTTACAGCTCATCCTCTACGTTGTTTTCTATCGAACAACCAACTGGGATGAAGACGACGAACCCGCTAACATCATATGA 669 0.4111 MVNSEAVRTAVGIIGNVISFGLFMSPVPTFISIFKAKSVQNFRSDPYMATILNCGVWAFYGLPFVTKDNTLVITINGFGFFLEIFYALVFFIYSTWSKRRKIMLIFLGEMIFLALLVFLVMTFVHTPSRRKVIVGPICIFFNVLMYFAPLTVMSVKYMPFLLSFANFANGIVWTTYALLKWDPFIVIPNGLGTLSGLLQLILYVVFYRTTNWDEDDEPANII 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01178 222 FunFam Bidirectional sugar transporter SWEET 130 216 - -
Vian1g01178 222 FunFam Bidirectional sugar transporter SWEET 9 99 - -
Vian1g01178 222 Pfam Sugar efflux transporter for intercellular exchange 133 209 IPR004316 GO:0016020
Vian1g01178 222 Pfam Sugar efflux transporter for intercellular exchange 11 95 IPR004316 GO:0016020
Vian1g01178 222 Gene3D - 130 217 - -
Vian1g01178 222 Gene3D - 7 98 - -
Vian1g01178 222 PANTHER RAG1-ACTIVATING PROTEIN 1 17 212 IPR047664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01178 Vian-Chr1 12611849 12613165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01178 1 187 Miscellaneous Gene Families AT5G62850 54.639 1.50e-74 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01178 K15382 - gmx:100810948 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01178 1 12611849 12613165 Vian1g01178 1 12611849 12613165 ECH