Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01173 ATGACCCACGCCTCCTTCTCCGAAGAAAACAACAAAGCTTTCGCCATTCTGGGCGCCGCCGTCATCGAAACTTCCGTCTCTTTTCACTTACTATCTAAAGACGTTGATATTTCTCCTAAAGAGCTTAACCGTCGATTGTCCCAAATCACCAGCGTCGACTCTTCCTGCGCCGTCGACGGAACTCGATTAGGTTTGCAAAAGATCGTTCGCGTCTCGCCCAAAACCAATTCCTCCGCCCCTGCCGTCGTTTGCGGCGCATTTCGAGCAATCTTCGCTGCCATTTCTATTGACACCGGCAAGTCCGATGATGCAGGTAACGTCTTCTGGAACCTTCATGGCGGCGACCTAGGATCTGCCGTGGCTCTTTGA 369 0.5203 MTHASFSEENNKAFAILGAAVIETSVSFHLLSKDVDISPKELNRRLSQITSVDSSCAVDGTRLGLQKIVRVSPKTNSSAPAVVCGAFRAIFAAISIDTGKSDDAGNVFWNLHGGDLGSAVAL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01173 122 SMART riboneu5 1 121 IPR000999 GO:0004525|GO:0006396
Vian1g01173 122 Pfam Ribonuclease-III-like 1 101 IPR000999 GO:0004525|GO:0006396
Vian1g01173 122 ProSiteProfiles Ribonuclease III family domain profile. 1 99 IPR000999 GO:0004525|GO:0006396
Vian1g01173 122 SUPERFAMILY RNase III domain-like 1 108 IPR036389 GO:0004525|GO:0006396
Vian1g01173 122 Gene3D Ribonuclease III domain 1 116 IPR036389 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01173 - - gmx:100527745 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01173 1 12564940 12565308 Vian1g01173 1 12564940 12565308 ECH