Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01158 ATGGCATTACGGGAGCTTGTACTGCTGGGGATATTGCTACTGGTTTGTGTTGCCAAGGTTTCATCTGATGTTAACACAGAAAAAGAAGAACTTCGCTTTCCTGATGACCCTCTTACAGTGAGAGACGGGAACAGAAGGCTAATGCAAGACATAGATTGTGGAGGGAAGTGCAAAACAAGGTGCGGTGCCCATTCAAGGCCAAATTTGTGCCACAGAGCATGTGGCACGTGCTGTGTGAGATGCAAGTGTGTTCCACCTGGTACTTCTGGTAACAGGGAGCTCTGTGGGACTTGCTACACTGACATGACCACCCATGGCAACAAGACCAAGTGTCCTTAG 339 0.4867 MALRELVLLGILLLVCVAKVSSDVNTEKEELRFPDDPLTVRDGNRRLMQDIDCGGKCKTRCGAHSRPNLCHRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01158 112 Pfam Gibberellin regulated protein 52 112 IPR003854 -
Vian1g01158 112 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01158 Vian-Chr1 12444225 12445051 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01158 - - gmx:100793143 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01158 1 12444225 12445051 Vian1g01158 1 12444225 12445051 ECH