Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01063 ATGCCTTTGAGTAGAAGAAGCCACACACATGCACGCCATCGCCATAGCCATAACATTAATCTCTTTACAGTCATGCTCGGCTTCACATCAAACTCTAATCACTCTTTCTTCTTTCTCTTCTTCTGCCTCTTTCTCTTTCTCTTTTCGGCTTCTACAGCAACACCTTCAGATTGCCTTGAAGATGTTAACCAGCGGTATGAGAAGGTGTTGGTGGTGCCGCCATGGACGGCCAGGAGATCAACGGCCGAAGGTGCAAGTCCGAGGAATGGGACTCTGGTGCTTGCTAAGGAGAGAACTCGCCGGCAAGATTGGTTTAACGGTTTTACCCTTTACAAAGGTGGCTGGAATATCAGCAACGCGTATTATATAAAGTCAGTTATGTCTACTGCGTTTCCTTTTTTCGTTGTGGCTGCAGCCTGGTTCGTGATTTTTGGAGTTGTTTTACTTATCGGCTGTGCTTGTTGCTGCTGTTGCAACGGAGGAGAACCAAGCGACTATTCCAAAATTGTCCATTATTTTTCGTTGTTCTTGCTTATACTCAGCACCATTATCACAATAGGTGGATGTGCTCAGTTGTACTCTGGTCAGGGGAATATTGATGGAAGCACTTCCGAGACACTTGATTACGTTTTAAATCAGGCACAATTCGTGGCTGAAAACCTCAACACCATATCAAATTATTTCGATTCGGCTAAGCGCGTTGTGAGGGAGCCTCCTCTGCCACTAGACATAGATCTTGGACCGGACCTTGATGACATCAAATTAAAAATAGACCGTGCTGCTGATACTCTCTCCAACAAAGTTAGCGCTAACTCAAAGACCATACGCAAAGCCATAGATGTAGTAAGACTGGCTCTCGTTATCGTTGCTGTTGTTTTGTTCTTTGTTGCATTTCTCCGGCTCTTCTTTTGTTTACTTGCGTGGAAGTGTCCAGTGTACTCCTTGGTAGTTATTGGATGGATTCTTGTCACTTCTACCTTGGTACTTTGTGCTGCATTTATTTTTGTTCATAATGTGACTGGAGATACATGTGTTGCGATGGATGAATGGGTTGTGAACCCCACCGCCCACACTGCACTGGATGACATTTTTCCATGCGTGGAGAAAAAAGCTGTTCTGGAAACATATTTAAAAAGCAAGATCCTCACATATAAAATCGTTGAAGCATTTGACAAAGTCATTTCCAACTTCACCAACTCAAATACTCAATCAGGCCCCCTCGTCCCTCTTCTCTGCAATCCATTTAATTCAGACCTAACAAGTCGCAACTGCTCTTCAGGGGAAGTCACATTCCAAAACGCCATCCAGGTTTGGAAAAACTTTACGTGCCAGGTTTCGTCGAGTGAAAAATGTACGAGTGCAGGTCGTTTGACACAGAGCATTTACACGAAACTGGGAGATGCAGTGAATGTGACGTACGGTTTATTTGAGTATGGGCCATTTATTGCTGACTTAGTTGACTGCAATTTTGTTCGGAGAACGTTCAAGGACATTAGCACCCATTATTGTCCACCTCTGCGAAGATATTGTGAACAGGTTTATTTGGGATCAGTTCTGGTTTCTGCAGCAGTAATGCTCTCTTTGATATCTTCGCTCTTCTTTGTCAGAGAGCAGTGGATGTTTCTTCACAACAATGGTGTTCTTTAG 1647 0.4372 MPLSRRSHTHARHRHSHNINLFTVMLGFTSNSNHSFFFLFFCLFLFLFSASTATPSDCLEDVNQRYEKVLVVPPWTARRSTAEGASPRNGTLVLAKERTRRQDWFNGFTLYKGGWNISNAYYIKSVMSTAFPFFVVAAAWFVIFGVVLLIGCACCCCCNGGEPSDYSKIVHYFSLFLLILSTIITIGGCAQLYSGQGNIDGSTSETLDYVLNQAQFVAENLNTISNYFDSAKRVVREPPLPLDIDLGPDLDDIKLKIDRAADTLSNKVSANSKTIRKAIDVVRLALVIVAVVLFFVAFLRLFFCLLAWKCPVYSLVVIGWILVTSTLVLCAAFIFVHNVTGDTCVAMDEWVVNPTAHTALDDIFPCVEKKAVLETYLKSKILTYKIVEAFDKVISNFTNSNTQSGPLVPLLCNPFNSDLTSRNCSSGEVTFQNAIQVWKNFTCQVSSSEKCTSAGRLTQSIYTKLGDAVNVTYGLFEYGPFIADLVDCNFVRRTFKDISTHYCPPLRRYCEQVYLGSVLVSAAVMLSLISSLFFVREQWMFLHNNGVL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01063 548 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 40 538 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01063 Vian-Chr1 11343954 11347171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01063 - - vum:124827516 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01063 1 11343954 11347171 Vian9g00072 9 578648 582030 ECH
Vian1g01063 1 11343954 11347171 Vian1g01063 1 11343954 11347171 ECH