Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00906 ATGGGTGGTGGAGCTCTTGAAACGAATGGTTTAACAAATGGGGAAACTGAGAACAGTCTTCACAGACAGTTTTCTCCAGCTCATGCTGCACTCGACAACTCGCTTTCTCATGCCAGTGATGCTGTTGCTGACCATGATGTTCCTGCCAAGAGGGCCAGGCTGCAGAAGGAATTGACATTTCAGGATATGTATCAAAATGAGGGCGTGTTTGACGAGGATGACGAGGATGACAGTGATTGGGAGCCGTTTCAGTTACACAAGTGTGTGGAATTTGAAATCAAAAAGTGGTGCTGCAGAAACTGTACTATGATTAATTTGGATTGTAATGACTGTTGCTATATATGTGGGGAGCACAGGGAATCTAAAATCCTCAGCCATGGGTTTTTTGCATCTCCTTTAGCTCAAGACGACGATCTGATTGAAGTCCAGGGAGATATAAAAGGACTGAAAGGTTTTAAAAATAGAGATGTGTGTAGGAAACCCAAAGTCCTAGGGAGCTTGGTGTACGAGTGGAATGTTTATGGCAAAAAGAAACTTATACAGGCCTGGGTTGATAAGAAATCACCTCCACATCCTGAGAGGCCAGATCGTCTTCAAGTCATTGCTGCTAGTCTTTCTAGAGCTGAAGTAACTCTTGCATCCTTAACCAATCTTATCATTACGATATTGGAATTGAAGGTTCATTCTTTGGAGCATATTGAGTCTGTGGAAGTTACAACTGAATCACTCTCTAGTTATTTCACTCCAGACACATATGCCAATCAGCATTCAGCACTTGCTGCTAGGTTGGCTGCTGGGTTATGTGCTGATCTGGCATCTGCAATTGTTTCCGGACGTGCCAAAAATGGATTTGCTTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTAAGACAGGCAATGGGGTTCTGCCTTCACAATAATGCTGCTGTGGCAGCGTTGGCTGCTCAAGCTGCAGGGGCTAGGAAAGTGCTAATTTTAGATTGGGATGTTCATCATGGAAACGGGACCCAAGAAATATTTGAACATAACAAATCAGTCTTGTATATATCATTGCATAGACACGAGGATGGAAAGTTTTATCCTGGTACTGGAGCTGCTGAAGAGGTACTTGACTGCAGACGAAATTTCAAATTAAAACTGATGCTGCTGGCCAACTTAGCCAGCTATAATCTTCGATCTATATCGTCTTCCGCAACTGCAGTAATCAAGGTATTACTGGGTGAGAGTCCTGGATGTGAACTGGAAAATAGTTTTCCTTCCAAAGCTGGCCTGCTAACCGTTCTGGAAGTCCTCAAAATTCAGATGAAATTTTGGCTTTCCTTGGGTCCGATTTTTGTGAATTTGGAGTCACAATGGAGGATGTACTGTTTCCAAAAAAAAAGGAAACAGATTAAGAAACGACGCCGACTTGTGGTTCCAATGTGGTGGAGGTGGGGACGAAAAAGTTCATTGTTCTATTTTATGAACGGCCACCTTCATAAGAAATCAAAGTGA 1494 0.4311 MGGGALETNGLTNGETENSLHRQFSPAHAALDNSLSHASDAVADHDVPAKRARLQKELTFQDMYQNEGVFDEDDEDDSDWEPFQLHKCVEFEIKKWCCRNCTMINLDCNDCCYICGEHRESKILSHGFFASPLAQDDDLIEVQGDIKGLKGFKNRDVCRKPKVLGSLVYEWNVYGKKKLIQAWVDKKSPPHPERPDRLQVIAASLSRAEVTLASLTNLIITILELKVHSLEHIESVEVTTESLSSYFTPDTYANQHSALAARLAAGLCADLASAIVSGRAKNGFALVRPPGHHAGVRQAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEHNKSVLYISLHRHEDGKFYPGTGAAEEVLDCRRNFKLKLMLLANLASYNLRSISSSATAVIKVLLGESPGCELENSFPSKAGLLTVLEVLKIQMKFWLSLGPIFVNLESQWRMYCFQKKRKQIKKRRRLVVPMWWRWGRKSSLFYFMNGHLHKKSK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00906 497 ProSitePatterns Zinc finger RanBP2-type signature. 96 115 IPR001876 -
Vian1g00906 497 PANTHER HISTONE DEACETYLASE 9-RELATED 388 442 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Vian1g00906 497 Gene3D Histone deacetylase domain 167 386 IPR037138 -
Vian1g00906 497 PRINTS Histone deacetylase superfamily signature 322 337 IPR000286 -
Vian1g00906 497 PRINTS Histone deacetylase superfamily signature 289 312 IPR000286 -
Vian1g00906 497 SUPERFAMILY Arginase/deacetylase 182 369 IPR023696 -
Vian1g00906 497 Pfam Histone deacetylase domain 191 386 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00906 Vian-Chr1 9482919 9493380 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00906 - - gmx:100804724 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00906 1 9482919 9493380 Vian1g00906 1 9482919 9493380 ECH