Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00900 ATGGCGAAACCTCGCAAGACCAAGAACAACGAAGACCCCAAGCCCGAAAACTCTGGTGCCCTAGTTCATCACCAGAAGCTATGTCTCTCAATTGACATCGACAAACGCCTAGTCCACGGGTACACTGAATTGGAGATTGCGGTGCCGGAGATTGGGATCGTAGGGTTGCACGCGGAGAATTTAGGGATTGAGAGTGTTTGGGTCGATGGTGAGCCCACGGAGTTCGAGTATTACCCGCATCAGCAGCAGCAGGTGGAAGATGATAAGAGGTTTAGTTCTGTGTGTTCTCCTAGCTCTGCTGCCGATGCTGCTGTCTCAGTGTACATGTCCTCTCTGGAGAAGGAGCTGGTGCCCAATTTACTTATTAACTGCTGTAAACCTTCCAAGACTGAAAGTGAACAACAGCAGGAGCAACCAGTTCCCGAGAACGGGTTTCACTCCACGGCCGAGCCCAAACAGAATGTGAGAATTGTTCGTATTGACTATTGGATAGAAAAGGCAGAGACAGGAATCCACTACAGAAATAATCTTCTTCATACTGATAATCAGATAAGGAGAGCTAGATGTTGGTTCCCCTGTATAGATGACAATTCACAACGATGCTGCTATGACCTGGAGTTCACCGTAGCACACAATCTTGTGGCTGTTAGTACGGGATTCTTGCTTTATCAGGTCTTAAGCAAGGACAATCCTCCTAGGAAAACATATGTTTATAAATTGGATGTTCCAGTAGCTGCAAGGTGGATATCTTTGGCTGTTGCCCCATTTGAAATTCTTCCTGATCACCAATTTAGTCTCATATCACACATGTGCTTGATGCCTAATCTGTCAAAGATGCGGAATACAGTGGAATTTTTCCACAGTGCCTTCAGCTGCTATAAGGATTATCTTGCTGTAGACTTCCCATTTGACTCATACACGCAAGTTTTCATAGAGCCAGAGACGGCTGTGTCTTCACTGAGTTTAGGGGCCTCTATGAGTATATTTAGTTCACAAGTTTTGTTTGATGAGAAGGTTATTGATCAGACTATTGATACAAGGGCAAAACTTGCATATGCTCTTGCAAGACAGTGGTTTGGCGTGTATATCACTCCGGAGACACCAAATGATGAGTGGCTCTTGGATGGACTTGCTGGCTTCTTGACAGATTTTTATATCAAGAAACATTTGGGAAATAATGAGGCCCGATATCGGAGATACAAGGCAAATTGTGCTGTTTGCAAAGTTGATAATGGTGGAGCGACAGCTTTGAGCTGTTCAGCTTCCTGCAAGGATTTATATGGAACTCAGTGTATTGGTTTGTATGGAAAAATAAGATCGTGGAAGTCTGTGGCTGTTCTTCAGATGTTGGAAAAGCAAATGGGTCCTGAATCTTTCCGTAGAATTTTACAAACGATAGTTTCTCGAGCTCAAGATAAAACACGTTCCATGAAGACTCTAAGTACTAAGGAGTTTCGACATTTTGCCAATAAGGTTGGGAATCTTGAACGTCCGTTTCTTAAGGATTTCTTTCCACGGTGGGTTGGTTCTTGTGGGTGTCCTGTTTTAAGGATGGGGTTTTCCTATAACAAAAGGAAGAATATGGTTGAATTAGCTGTGTTGCGAGGATGTACAGCGTTGCAGACTTCAACTACATCCACTCTTGATATTAATCCAGAGACAGAAAATAGAGATGGAGATACTGGATGGCCTGGTATGATGAGCATCAGGGTATATGAACTTGATGGTATGTATGACCATCCTATTCTGCCAATGGCTGGTGAAGCATGGCAGCTACTGGAAATACAATGCCACTCAAAGCTTGCTGCTAGACGCTTTCAGAAGCCCAAGAAAGGGTTAAAACATGATGGATCTGATGATAATGGTGACGTGCCTTCCATGGATGTGCGCTCAAATACTGAGTCCCCTTTATTATGGATCAGAGCAGATCCTGATATGGAGTACCTTGCCGAGGTTCACTTTAACCAACCTGTTCAGATGTGGATCAATCAATTAGAGAAGGACAAAGATGTTATTGCTCAGGCACAAGCAATTGCAGCCCTTGAGGCATCACCACAACTATCATTTTCAATTGTAAACGCCTTAAACAATTTTCTCGGTGACTCCAAGGCCTTTTGGAGAGTACGGATTGAAGCAGCATTTGCATTGGCAAATTCAGCATCCGAGGAAACTGATTTTTCTGGTCTACTCCATTTGGTGAAATTTTACAAGAGTCGAAGGTTTGATCCTGACATTGGACTTCCAAAGCCGAATGATTTTCATGATTTTGCTGAGTATTTTGTTCTTGAGGCTATTCCCCATGCTGTTGCCATGGTTAGAGCTGCTGACAAGAAAAGCCCAAGAGAGGCTATCGAGTTTGTTCTACAGCTATTGAAGTACAATGACAACAATGGGAATCCTTACTCAGATGTCTTTTGGCTTTCTGCATTAGTCCAATCGGTTGGTCAGCTTGAGTTTGGGCAACAGAGTATTCTGTTGTTGTCATCACTTCTCAAACGCATTGACCGGCTTCTACAATTTGATAGTCTCATGCCAAGATATAATGGAATCTTGACTATCAGTTGTATCCGAACATTGACCCAGATTGCTTTAAAGCTTTCGGGGTTCATTCCTCTTGATCGAGTTTATGAACTTGTAAAGCCTTTTCGTGACTTGAAGACACTCTGGCAAGTTCGAATTGAAGCAAGCAGAGCACTGCTTGACCTTGAATTCCACTGCAAGGGCATTGATTCAGCATTGCTTTTATTTATCAAGTACTTAGAGGAGGAGCATTCCTTAAGAGGACAGTTAAAACTAGCCACCCATGTTATGAGGCTATGTCAGATGAGGGATGGATTGAATTCAGAAGAGGAAATTACTAGTCAAACTCTTGTCTCTATGCTTAATTTACTGGAAGGGCGTACTGCTTTTAATAATGTCTTTCTCCGGCATTATTTGTTCTGCATACTACAAATACTTGCAAAAAGACCACCAACTCTTCATGGGGTTCCCAGGGAAAATAGAACGTTGCATATGAGTCTTACAGAAGCTTGTAACTATCAGAAGAACATGTTTGTTCTTGATTCGGATAGCAAACCTTTGGATCTGCCAAGCTCTACTCAAAACCCTACACCAAATCTTGGCCTGGATGGTTTGAGGGATGCACTTAACGAAGCTTCTAAGGACCCACCTGATGAAGCTCCGACACAGGTGCCTCCGACACAGGTGCACATTGAAGCTCTGAATGAAGCACCCCTAGAGAAAGCCGAAGAAGTATATACTGAATTTCCACAGGAAGCACCAATGGAAGCTCCAAATGAAGTTTCCAAGGAAGCTGATACTGTATCGAATAGCCATGAAAGAAAGAGGCTCATTAAAATCAAGGTCAAACAATCTTCTGCCACCAGTAGGGCTGATACTGATAATCAAGTGGTTGAACGTTCTTTAGGTGGTCGTAATGAAATGGACCATGGAGCTAGCAGTTCAGTTTCTGTAGATGCACCCCAGAGAAATTTTCCCGAGACTCTTAGCATGAGTAATCAAAATATAGACGAAGTTAATTCTTGGCATGATCGTGGTTCGCGCATGACTGCTAGCATTGGTAGTGCTAAATTTTTGAGTGACGGTGATGAATTGGTCAAAGAACTTCAGTGCACTGCTGATTCAAGTATAGTTTATTCACAACCTCAGCCAGAAGATCCGTCATCATCCAGTATTATACAGGATAACAATGTAGATGCTGATGCACGACGATATGCCAGCCTTCAAACTCTTTCAGTTGCAAGATTTGATCCTGACGGAGAATCATTAGGTAAAGAAATTTCTGCTCGTGGCAAGGAAAAACACAAAAGCAAGGAAAAGAAACGAAAACGGGAAAGTAATAAAGGACATCATGATGATCCAGAATATTTGGAGCGAAAACGACTAAAGAAGGAGAAAAAACGACGGGAAAAAGAAATGGCAAAACTTCAGAGTGATGAAGCGAAGAGGTCCTCTGTAGACTTGTCAAGTAAGAAAGAGGAACCTGTAGTGGACGTTACCAGACAGATTAAATCTGTTGAGCCCAGCGACGGACATAATTCTAAATTAGAAACCAAAAAGATTGATAGCAAACCGGATCCATCTGAAGGCACATCCGGTGCACCAAAAATTCGAATTAAAATTAAAAACCGAATGCTCAACAAGTCATAG 4170 0.4259 MAKPRKTKNNEDPKPENSGALVHHQKLCLSIDIDKRLVHGYTELEIAVPEIGIVGLHAENLGIESVWVDGEPTEFEYYPHQQQQVEDDKRFSSVCSPSSAADAAVSVYMSSLEKELVPNLLINCCKPSKTESEQQQEQPVPENGFHSTAEPKQNVRIVRIDYWIEKAETGIHYRNNLLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVAHNLVAVSTGFLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFEILPDHQFSLISHMCLMPNLSKMRNTVEFFHSAFSCYKDYLAVDFPFDSYTQVFIEPETAVSSLSLGASMSIFSSQVLFDEKVIDQTIDTRAKLAYALARQWFGVYITPETPNDEWLLDGLAGFLTDFYIKKHLGNNEARYRRYKANCAVCKVDNGGATALSCSASCKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSMKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTALQTSTTSTLDINPETENRDGDTGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGLKHDGSDDNGDVPSMDVRSNTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLGDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLSALVQSVGQLEFGQQSILLLSSLLKRIDRLLQFDSLMPRYNGILTISCIRTLTQIALKLSGFIPLDRVYELVKPFRDLKTLWQVRIEASRALLDLEFHCKGIDSALLLFIKYLEEEHSLRGQLKLATHVMRLCQMRDGLNSEEEITSQTLVSMLNLLEGRTAFNNVFLRHYLFCILQILAKRPPTLHGVPRENRTLHMSLTEACNYQKNMFVLDSDSKPLDLPSSTQNPTPNLGLDGLRDALNEASKDPPDEAPTQVPPTQVHIEALNEAPLEKAEEVYTEFPQEAPMEAPNEVSKEADTVSNSHERKRLIKIKVKQSSATSRADTDNQVVERSLGGRNEMDHGASSSVSVDAPQRNFPETLSMSNQNIDEVNSWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNVDADARRYASLQTLSVARFDPDGESLGKEISARGKEKHKSKEKKRKRESNKGHHDDPEYLERKRLKKEKKRREKEMAKLQSDEAKRSSVDLSSKKEEPVVDVTRQIKSVEPSDGHNSKLETKKIDSKPDPSEGTSGAPKIRIKIKNRMLNKS 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00900 1389 MobiDBLite consensus disorder prediction 1148 1172 - -
Vian1g00900 1389 MobiDBLite consensus disorder prediction 1024 1066 - -
Vian1g00900 1389 SUPERFAMILY ARM repeat 455 990 IPR016024 -
Vian1g00900 1389 MobiDBLite consensus disorder prediction 1122 1140 - -
Vian1g00900 1389 MobiDBLite consensus disorder prediction 1026 1040 - -
Vian1g00900 1389 MobiDBLite consensus disorder prediction 1286 1301 - -
Vian1g00900 1389 MobiDBLite consensus disorder prediction 1259 1273 - -
Vian1g00900 1389 FunFam Transcription initiation factor TFIID subunit 261 512 - -
Vian1g00900 1389 MobiDBLite consensus disorder prediction 608 630 - -
Vian1g00900 1389 Coils Coil 1297 1324 - -
Vian1g00900 1389 Gene3D Neutral Protease Domain 2 264 512 IPR027268 -
Vian1g00900 1389 CDD M1_like_TAF2 24 508 - -
Vian1g00900 1389 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 1308 IPR037813 GO:0005669
Vian1g00900 1389 FunFam Transcription initiation factor TFIID subunit 2 112 253 - -
Vian1g00900 1389 MobiDBLite consensus disorder prediction 1091 1172 - -
Vian1g00900 1389 MobiDBLite consensus disorder prediction 1309 1340 - -
Vian1g00900 1389 MobiDBLite consensus disorder prediction 1348 1366 - -
Vian1g00900 1389 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 18 254 IPR042097 -
Vian1g00900 1389 Pfam Peptidase family M1 domain 284 481 IPR014782 GO:0008237|GO:0008270
Vian1g00900 1389 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 275 517 - -
Vian1g00900 1389 Gene3D tricorn interacting facor f3 domain 21 253 IPR042097 -
Vian1g00900 1389 MobiDBLite consensus disorder prediction 1254 1389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00900 Vian-Chr1 9387281 9413561 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00900 K03128 - gmx:100792795 2469.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00900 1 9387281 9413561 Vian1g00900 1 9387281 9413561 ECH