Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00896 ATGTTTGGTGGGAGGGAAAGATTTGCTACGGTGCTCTTGATGAGACCCACAGAAATTGTTATATTGTGGCTTTCAAAAGTTTTTTCTCTAACTCCTCTAGACCGGGGCCCCAACTCTGCCCACCTGGGCGGCATCTTCACCCTTCTCGTAACCGCCTCCGTCTTTCTCCTCCTGGCGGGGCTCACCCTCACAGGCGCCATTCTCGGCCTCATCTTTTTCACGCCTCTAATCATCGTCTCAAGCCCCGTCTGGGTTCCAGCCACCATCATCTTGTTCGTCATCACCGCGGGCTTCTTCTCCGTCTGTGGATTCGCGGTGGCCCTTGTCGCCGCCTTGTCCTGGACGTACCGCTACTTCAGAGGCCTCCACCCACCCGGTTCCGACCGGGTCGACTACGCCCGGAGCCGCATATACGACACCGCCAGCCACGTCAAAGACTACGCCAGAGAATACGGTGGCTATTTGCACAGCAAGGTCAAGGATGCAGCACCCGGCGCCTGA 501 0.5749 MFGGRERFATVLLMRPTEIVILWLSKVFSLTPLDRGPNSAHLGGIFTLLVTASVFLLLAGLTLTGAILGLIFFTPLIIVSSPVWVPATIILFVITAGFFSVCGFAVALVAALSWTYRYFRGLHPPGSDRVDYARSRIYDTASHVKDYAREYGGYLHSKVKDAAPGA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00896 166 PANTHER OLEOSIN 41 160 IPR000136 GO:0012511|GO:0016020
Vian1g00896 166 Pfam Oleosin 44 152 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00896 Vian-Chr1 9338110 9339294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00896 37 166 Lipid Metabolism Gene Families AT3G18570 58.462 5.17e-46 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00896 - - vum:124837146 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00896 1 9338110 9339294 Vian1g00896 1 9338110 9339294 ECH