Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00894 ATGAGTCTCATGAACTCTCCCACACGGGTGACGGTTGGTGATGCTAATTACATGGACTGGACTGGCGTTAACAACCACTACAGAACTGCTTACAAAGTGGACGACCAAAAATCCGTGATGGATGTGGCACTCATTTCAAATATGGATCCTGTAAATATTGGGCTGGCTTGTTCAGACAAGCCAGGTCCCGTCACTTCCCTGAAGCCCAGAAAGAAAACAATGACATCAGTGTATTTGAAGTTCTTTGAGACGGCTGTTGATGGCAAGACTCGCAGATGCAAGTTTTGTGGACAGAGCTATTCCATTGCAACCGCTACAGGTAATCTGGGAAGGCATCTTGCTAATCGCCATCCAGGTTATGACAAGTCAGGTGACGCTGTCAGCAATTCAGCTGCAAGGCCTATCACTGTGGTGAAGAAGTCACAGCCTCCAGGAAAAGCAAACCAGGTGGATTATGATCATCTAAATTGGTTGCTCGTTAGGTGGCTTGTTCTAACTGCTCTTCCTCCTTCAATTCTAGAAGAGAAGTGGCTTGTGAATTCCTACAAGTTTTTGAATCCTTCCATACAACTCTGGCCAAGTGACAAGTATAGAACTGTACTTGATGAAGTCTTCAGAAGCATGAGGGAAGATGTAAGAGCATTGTTGGAACAGGTTTCTTCAAAGTTGTCCATTACACTTGATTTCTGGACCTCCTTTGAACAGATTTACTATATGAGTGTGACATGTCAATGGATCGACGAAAACTGGTGCTTCCAGAAGTTGCTTCTTGATATCTGTCGAATACCTTATCCATGTGGGAGTACAGAGATATATCGGTCCCTCGTAAAAGTTCTCAAATTTTACAATATTGAAACCAGAATTCTGTCCTGTACCCACGACAATAGTACAAGTGCCATGCATGCTTGCCATACTTTGAAAGAGGACTTAGATGGCCAGAAAATAGGGCCTTTCTGTTATATTCCCTGTGCTGCTCGAACTTTGAATGTGATAATAGATGATGGATTGAGATCTGCAAAACAAGTAATTTCTAAGATACGGGAGTTTGTAATAGAGTTAAATGCCTCACCAGTGATCTCTGAGGATTTTATTCAAATATCCACTGCTTATCAAGAAGGCATGTGGAAATTTCCTCTTGATATTTCAGCGAGGTGGAGTGGAAACTACCAAATGCTTGATCTTGTTCGCAAGGCAGGTAAATCAGTGGATGCTGTTATTCGAAAATACGAAGAAATGCTAGGCAGCAGGATGCTGCTGGGATCTTCTGACAAAAGTGTGGTTAGCATCATGCATCAATATCTTGAACCATTCTACAAAACCACAAACAACATCTGCACAAGTAAGGTGCCAACGGTTGGGCTTGTGCTTTTCTTCATGGATCACATATCAGAGACCATTAATTCCTGCAGAGAATCGCGCCACAGCCCAGAATGGCTAAAAAATGCTGCAGAAGAAATGGCTAAAAAGGCCAGAAACTACATCCACCAGGTTTGCAACATATTCACTTATATGACTGCAATTCTAGATCCTCGAATAAAGGGAGAGCTGATCCCTGATAGTTTAAACTCGGAAACCCTTTTGGACGAAGCGAGATCCCATTTTATAAGAAATTATTCTACCAGCCATTTCTCATCCATGAGTTCTGGATACAATGCTCAAGAAATTGAAGAAGCAGGAAGCGTTTCCTTTGCAGAGGAAATTGCACGCAAGAAGCGAAGGACAACCATGAGTTCTGCTACTGATGAGCTAACACAGTACCTTTCAGAGGCTCCAGCTCCAATACCAACAGATGTTCTAGAGTGGTGGAAGGTCAACAGTACACGCTACCCTCGACTATCTGTTATGGCTAGAGATTTCCTGGCTGTGCAGGCAACTTCAGTTGTGCCTGAAGAACTTTTCTGTGGCAAGGGTGATGAAATTGACAAGCAACGAATCTGTATGCCACATGACAGCACACAGGAAATTCTTTGTATCAAGTCATGGATTCAGGTTGGCGTCAAGTTTAAGTTTAAATCCACTGAAATAGATTATAAGCGGTTGATGGAATTGGCAGCAGCTGCTGCTGCAACAGATAATAGTCCTGCAAGTTCTGATAAGAAGCCAAAGTAA 2109 0.4277 MSLMNSPTRVTVGDANYMDWTGVNNHYRTAYKVDDQKSVMDVALISNMDPVNIGLACSDKPGPVTSLKPRKKTMTSVYLKFFETAVDGKTRRCKFCGQSYSIATATGNLGRHLANRHPGYDKSGDAVSNSAARPITVVKKSQPPGKANQVDYDHLNWLLVRWLVLTALPPSILEEKWLVNSYKFLNPSIQLWPSDKYRTVLDEVFRSMREDVRALLEQVSSKLSITLDFWTSFEQIYYMSVTCQWIDENWCFQKLLLDICRIPYPCGSTEIYRSLVKVLKFYNIETRILSCTHDNSTSAMHACHTLKEDLDGQKIGPFCYIPCAARTLNVIIDDGLRSAKQVISKIREFVIELNASPVISEDFIQISTAYQEGMWKFPLDISARWSGNYQMLDLVRKAGKSVDAVIRKYEEMLGSRMLLGSSDKSVVSIMHQYLEPFYKTTNNICTSKVPTVGLVLFFMDHISETINSCRESRHSPEWLKNAAEEMAKKARNYIHQVCNIFTYMTAILDPRIKGELIPDSLNSETLLDEARSHFIRNYSTSHFSSMSSGYNAQEIEEAGSVSFAEEIARKKRRTTMSSATDELTQYLSEAPAPIPTDVLEWWKVNSTRYPRLSVMARDFLAVQATSVVPEELFCGKGDEIDKQRICMPHDSTQEILCIKSWIQVGVKFKFKSTEIDYKRLMELAAAAAATDNSPASSDKKPK 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00894 702 SUPERFAMILY Ribonuclease H-like 209 664 IPR012337 -
Vian1g00894 702 Pfam Domain of unknown function (DUF4413) 445 525 IPR025525 GO:0003677
Vian1g00894 702 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 39 658 - -
Vian1g00894 702 SMART bed5 73 120 - -
Vian1g00894 702 Pfam hAT family C-terminal dimerisation region 582 662 IPR008906 GO:0046983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00894 - - ahf:112708868 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00894 1 9326260 9330234 Vian1g00894 1 9326260 9330234 ECH