Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00880 ATGGAGTCTGACGAAGACGATTTTGTTTTCTATGGAACACCGATAGAGCGTGAGGACGATGTAATCAGTCGCAAGAAGAAGGCCATTGCCGAGTCCTCCGGTCAACTTCGAACTCTCCCAGCTTGGAAGCAAGAGGTTAGAGACGAGGAAGGGCGGAGAAGATTCCATGGAGCATTTACAGGAGGCTATTCTGCTGGTTACTATAATACAGTGGGCTCAAAAGAAGGGTGGGCACCCCAGTCATTTAAATCATCCAGGAAGAACAGAGCAGAATTCAAGGAGCAGAATATACTGAATTTTCTAGATGAAGACGAGAAATCTGAGTTGGAAGGTCGTTTTTTGGGGACTACTTCACAGTTTGATACATTTGGTTTCACAGCTGCCGAAATTGCTCGCAAACAAGCTGAGACGGAACAGAAACAGAGACCATCCGTAATACCTGGACCTGTACCTGATGAAATAGTTGTTCCGGCCAATGAGTCAATAGGGGTAAAACTTCTCTTAAAGATGGGGTGGAGTCGTGGCCGCACGATCAAGGATTCACATTCTGATGCATTGTATGATGCCAGAAGACAGGCACGCAGAGCTTTCTTAGCATTTTCTTCTGATGATCCAAAAGTGAAGGTATCAGAGTCTGAGTCTGTCGAGGGTGATATTGTAAATTTTCCTGAGAAGCCTGTGAATGACGATGCTCAGATTTCTAAGAATACACCGGTTTATGTACTCAACCCAAAGCAAGATCTGCATGGATTAGGTTTTGATCCTTACAAGCATGCTCCGGAGTTTAGAGAGAAAAAAAGATCACGCTTAGCCAACAAGGGGGGACTTGGGTTCTCTAGAGATAGTCTTTTTGGTTTGAAGTCAGGAAAGGCTGCCCCCGGTTTTGGCATTGGAGCTCTGGAGGAGCTTGATGCTGAGGATGAGGATGTGTATGCCACTGCTTACGAATTCGAAGATGCTGTTCAAGAAGTAGAAGAACCTTCAACATTGAGATTAGAAAACCGGACAAAGAAAGAGCCGAAGGACAAGGGTGATCTGCCTGGTTTCAGAGTTGCATCCAATTCTGACTATAAAATGGAAAGATTTGAGGCTCCTCTGATTCCTAAGGATTTTGTGCCCCACCACAAATTTTCTGGACCACTTGACCTTAACCGCAAGAGCTATGAAGTGACTCCACCGGACACTCCTCCTCCAGAGGATGGCAATTTAAAATTATTAATTGAAGGGGTTGCTAATCTGGTAGCTAAATGTGGAAAATTATATGAGGATTTATCTAGAGAAAAGAATCAATCAAATCCATTGTTTAGTTTTCTTTCTGGAGGAACTGGCCATGAATATTATGCTAGGAAATTGTGGGAGGCACAGCAGAAACACAATGATCAGACTAGTCAGCAATCGGATGGAAAAATGACTCCCGGTGTGAAGAGGCTAACAGCTGAGAGCCGAGGCCAGATCTTAGGGGAAAAACCTCTAGAAAAAAGCTCCGAAGGTCCATCCTCATTTGTTGCTTCGACAGATATTCAACTCCAATTTAATCTTACTGATACATTTACCAAGTCTACATCAGTTAGTGAGTTGATGAATGTAGAAAAGCCTTTCAAAGATGATCCAGCAAAGCAAGAAAGATTTGAGCAGTTTCTTAAGGAGAAATATAAAGGGGGATTGCGCTCTGCAAGTTCTAGTTTAGCTAGTGATATGTCAGAGGCTGCTCGTGCTCAAGAAAGACTGAGTTTTGAGGCTGCAGCTGAGGCAATAGAAAAAGGACGACAGGGCAGGGGAAGCAAGCCTTTGACTCCATCTGCCATGGATTTCATCCCAGGTGGTGTCATGCAGTTTACTTCTGGTGAATTAGAGCCAAAAAAAGACCTGCAAGCTGATGATATTTTGAGGAAGAAAACTTACCCTAAGAGGGAAGAGTTTCAATGGCGCCCTTCACCTCTTCTGTGCAAACGCTTTGATTTGATTGATCCTTATATGGGGAAGCCACCACCTGCTCCACGGATTAGGAGTAAAATGGATTCCTTGATTTTTACATCAGATTCAGTCAAAGGTATCAAAGTGGACGACCCTGTTACATCAATAAAAGACATCTCACCTTTGCAACAATATACTGCTGAGGACATAGCCAAAAGTATTACTGAAAATGAAATTGAAGGGGACGTGGAAGTTGAAAATATTGAAAGGCCAGTTGACCTGTACAAGGCTATTTTCTCCGATGATTCAGATGATGAAAGGGGAGATTCTGGTATTGGGAGAGTGGATAATCAAGAAAAGAAAGCTGAAGTAGCTAATACAGCTTTGAGCCGATTGATTGCCGGTGATTTTCTGGAATCATTGGGCAAGGAACTAGGAATTGAGGTTCCTCCTGATATTCCTTACCCCAAACAGAAGTCTAAGAACATTGCACCTCAGAAAGAACTTGTTAATGAAGATACAAAAATTGAAACCCTCGACAGTAAAAATAATGACCAGATATCCTTAAATCATGATTTGCTATATGATCAGCAAATTTCTCAGGAGGGTGGTCTATCAAAAAGTGTCACTATTCATGGAAATAACCGTGAGAACAGTAATGTGAAAACCAAGGGAGTCAGTACCATGAACTATAAACCCGACAGATCTGAGATGAATATTAATGATGTAAGGAAAATTAAATCGCCTCTAGTCCCCAACCATGACTATAGCAGCAGTTCAGAAGAAGAAAAAAGCAGAAAGCGATCTAGTAGGGAAAAATATGATGAGTACAGGAAGCTTAAAACCCCTGTAACACACCGCCGAAATTATAGTAGCAGTTCTTCATTAGAAGAGGAAAAGAGCAGAAAACGTTCTAGACATCATGGACATAAGAGGCGTGATGCAGGAAGTGATTCATCCAGTGATGACGAAAGAAGAGATAGGCACAGTTCAAGGTCAAAAGAAAAGAAAGGTTCTTCCCGAGAAAAAAGCAGAAGTGAAAAACACTCAAAACACCGCAAACACAGAAAGCATGAATCTCCAAATAGACACTCTCGTTATAGCAGTGAGAAGGACAATGCACGTTCCAGAAGTGAGAAAAAACGGAGGGAATGA 3069 0.4233 MESDEDDFVFYGTPIEREDDVISRKKKAIAESSGQLRTLPAWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWAPQSFKSSRKNRAEFKEQNILNFLDEDEKSELEGRFLGTTSQFDTFGFTAAEIARKQAETEQKQRPSVIPGPVPDEIVVPANESIGVKLLLKMGWSRGRTIKDSHSDALYDARRQARRAFLAFSSDDPKVKVSESESVEGDIVNFPEKPVNDDAQISKNTPVYVLNPKQDLHGLGFDPYKHAPEFREKKRSRLANKGGLGFSRDSLFGLKSGKAAPGFGIGALEELDAEDEDVYATAYEFEDAVQEVEEPSTLRLENRTKKEPKDKGDLPGFRVASNSDYKMERFEAPLIPKDFVPHHKFSGPLDLNRKSYEVTPPDTPPPEDGNLKLLIEGVANLVAKCGKLYEDLSREKNQSNPLFSFLSGGTGHEYYARKLWEAQQKHNDQTSQQSDGKMTPGVKRLTAESRGQILGEKPLEKSSEGPSSFVASTDIQLQFNLTDTFTKSTSVSELMNVEKPFKDDPAKQERFEQFLKEKYKGGLRSASSSLASDMSEAARAQERLSFEAAAEAIEKGRQGRGSKPLTPSAMDFIPGGVMQFTSGELEPKKDLQADDILRKKTYPKREEFQWRPSPLLCKRFDLIDPYMGKPPPAPRIRSKMDSLIFTSDSVKGIKVDDPVTSIKDISPLQQYTAEDIAKSITENEIEGDVEVENIERPVDLYKAIFSDDSDDERGDSGIGRVDNQEKKAEVANTALSRLIAGDFLESLGKELGIEVPPDIPYPKQKSKNIAPQKELVNEDTKIETLDSKNNDQISLNHDLLYDQQISQEGGLSKSVTIHGNNRENSNVKTKGVSTMNYKPDRSEMNINDVRKIKSPLVPNHDYSSSSEEEKSRKRSSREKYDEYRKLKTPVTHRRNYSSSSSLEEEKSRKRSRHHGHKRRDAGSDSSSDDERRDRHSSRSKEKKGSSREKSRSEKHSKHRKHRKHESPNRHSRYSSEKDNARSRSEKKRRE 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00880 1022 MobiDBLite consensus disorder prediction 324 346 - -
Vian1g00880 1022 MobiDBLite consensus disorder prediction 480 499 - -
Vian1g00880 1022 Pfam Protein of unknown function (DUF1604) 39 119 IPR011666 GO:0006397
Vian1g00880 1022 ProSiteProfiles SURP motif repeat profile. 406 450 IPR000061 GO:0003723|GO:0006396
Vian1g00880 1022 MobiDBLite consensus disorder prediction 846 1022 - -
Vian1g00880 1022 MobiDBLite consensus disorder prediction 846 873 - -
Vian1g00880 1022 MobiDBLite consensus disorder prediction 1001 1022 - -
Vian1g00880 1022 SMART surpneu2 404 456 IPR000061 GO:0003723|GO:0006396
Vian1g00880 1022 Pfam Surp module 406 453 IPR000061 GO:0003723|GO:0006396
Vian1g00880 1022 SUPERFAMILY Surp module (SWAP domain) 385 456 IPR035967 GO:0003723|GO:0006396
Vian1g00880 1022 Coils Coil 1009 1022 - -
Vian1g00880 1022 Gene3D Surp module 377 462 IPR035967 GO:0003723|GO:0006396
Vian1g00880 1022 MobiDBLite consensus disorder prediction 984 1000 - -
Vian1g00880 1022 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 1 1019 - -
Vian1g00880 1022 FunFam G patch domain-containing protein TGH 370 460 - -
Vian1g00880 1022 MobiDBLite consensus disorder prediction 323 350 - -
Vian1g00880 1022 MobiDBLite consensus disorder prediction 950 983 - -
Vian1g00880 1022 MobiDBLite consensus disorder prediction 895 921 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00880 K13123 - gmx:100796934 1506.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00880 1 9173056 9188343 Vian1g00880 1 9173056 9188343 ECH