Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00873 ATGTTCCGCATAAGCAACACCGTTGTCGGCGCGCTCAACATTCTCTCCTTGCTCCTGGGCGTGGCCGCCGTGGCCTCCTCCGCTTACATCCACATCCGCGGCGGCTCCGACTGCCAGAAGGTCCTGCAGGTGCCGCTTCTAGTCGGCGGCATCTTCGTGGTGCTGGTCTCCACCTTGGGAATCGTGGGGTCGCTGTACCGTGTCAACACTGCGCTCTACGCCTACCTCTTCGTCACGTTCGCGCTCATCGTGGGCCTCGCCTTCTTCACCGTCTTCACGCTGTTCGTGACGAACAGGAAGGTGGGGCAGCAGGTTTCCGGCAAGGGCTACGGCGAGTACAGGGTGGCCGATTTCTCGCACTGGCTGCAGCGCTACGTCGTCAACAACAAGAACTGGGACGAGGTGAAGAGTTGCTTGATGGACGCGCACGTGTGCCAGAACCTCGCCATCAACGGTGGCCGCAACAACGACTTCCTCATTTTCAAACACCTAACAACAACGCAGGCTGGTTGTTGTAAACCACCAGCGTATTGTGGGTTCATAATGAAGAATGGTACGTTCTGGGAAGTGCCAAAAGAGGGTCCAGCAGTGAATAATTCTGACTGCAGCACTTGGAACAACAGAGAAGACAAACTGTGCTACGATTGCAATTCATGCAAGGGAGGAGTTTTGGCTAACATAAGGAACCAATGGAGACGTCTCACTGTATTCAACGCATGCGTGCTTTTGGTAGTCACTGCCATATATGCCTTGGGCTGCTACGCCATCAAGAACAACAGATTCGATTCACAGTGCAACCACCCCAAAACACCATTTCCTTGA 822 0.545 MFRISNTVVGALNILSLLLGVAAVASSAYIHIRGGSDCQKVLQVPLLVGGIFVVLVSTLGIVGSLYRVNTALYAYLFVTFALIVGLAFFTVFTLFVTNRKVGQQVSGKGYGEYRVADFSHWLQRYVVNNKNWDEVKSCLMDAHVCQNLAINGGRNNDFLIFKHLTTTQAGCCKPPAYCGFIMKNGTFWEVPKEGPAVNNSDCSTWNNREDKLCYDCNSCKGGVLANIRNQWRRLTVFNACVLLVVTAIYALGCYAIKNNRFDSQCNHPKTPFP 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00873 273 Pfam Tetraspanin family 6 248 IPR018499 GO:0016020
Vian1g00873 273 PANTHER TETRASPANIN-8-RELATED 3 260 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00873 Vian-Chr1 9116060 9117098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00873 1 260 Miscellaneous Gene Families AT1G18520 45.113 7.84e-82 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00873 - - gmx:100815322 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00873 1 9116060 9117098 Vian1g00873 1 9116060 9117098 ECH