Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00860 ATGGAGCTGTGGAACAGAGCCCGAAGCTTTGCGGAAGAAGCAGCGAAACGATCGAATGATCTGTCCTTGGGAGCTTCCAAATTGAGCGATATCATTACAGAGACAACCAAAGAGATAGCGGCACAAGCTTCCAAGCACTTGACCCAACCTTCGCTCATAAACGACGTCGATCTCCACCGTTTTGGCATCACCGAAGAGTTGAGAGAATTCGTCAAAGGGATCACCATCACTACCTTTGAAGATTTCCCCCTTGAAGATGATACGGAATTTTCTGATGTTCCTGCGATTTCAAATGTCAGGCAGGATCTAACCGATTGGCAGGAAAAACATGCCGGTCTTGTTCTTTCTACCGTCAAGGAGATTTCTCGATTGAGGTATGAACTGTGTCCACGAGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCATACTGCACCCTATGAGAATAAGTACATGGAAGATGAAAAACTAAAATCTTCTGAACAAGGAAAAGATCGCATAGTCACGATGAAACCATTAAATGCTGAATTGATCTGTAACCAAGAGGCGCAGGAAATGCCAAAAAAGGACAATTTATCAACTTCAACTGAGCAAGACTTGGATGTATTTCTTCTGGGAGACGGAAACAGTGATGATGAGCCCGATGATGGCGATGGAAGATACAATGAAGATTTGGACAAACTGATGGATAATTCGGATGATGAGAAAGGGAAATGA 735 0.4245 MELWNRARSFAEEAAKRSNDLSLGASKLSDIITETTKEIAAQASKHLTQPSLINDVDLHRFGITEELREFVKGITITTFEDFPLEDDTEFSDVPAISNVRQDLTDWQEKHAGLVLSTVKEISRLRYELCPRVMKERKFWRIYFILVNNHTAPYENKYMEDEKLKSSEQGKDRIVTMKPLNAELICNQEAQEMPKKDNLSTSTEQDLDVFLLGDGNSDDEPDDGDGRYNEDLDKLMDNSDDEKGK 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00860 244 MobiDBLite consensus disorder prediction 192 206 - -
Vian1g00860 244 PANTHER BSD DOMAIN-CONTAINING PROTEIN 20 235 - -
Vian1g00860 244 SMART wurzfinal6 98 150 IPR005607 -
Vian1g00860 244 Pfam BSD domain 104 149 IPR005607 -
Vian1g00860 244 SUPERFAMILY BSD domain-like 62 154 IPR035925 -
Vian1g00860 244 Gene3D BSD domain 77 160 IPR035925 -
Vian1g00860 244 MobiDBLite consensus disorder prediction 226 244 - -
Vian1g00860 244 MobiDBLite consensus disorder prediction 191 244 - -
Vian1g00860 244 ProSiteProfiles BSD domain profile. 98 150 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00860 Vian-Chr1 8953785 8961162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00860 3 220 EF-hand Containing Proteins AT1G69030 40.625 2.89e-57 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00860 - - vra:106768410 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00860 1 8953785 8961162 Vian1g00860 1 8953785 8961162 ECH