Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00845 ATGCAGAGTTTAGTTCGCAGAGTGGTGGTGGAACAGCACCCCCATGGTCACGCCAAATCTCATAGTATCTTCCACACCTTCTCCTCTATTCTCAAACCTTCACAACCCCATTTGCATCAACGCAACCACATTCCCTCTTCCTTCCTCACTCACCAATCTCTTCACTTTCACTCATGTCGCTCATTTTCCTCCAAACTCCGCCCCTTTCTCTCCCGACCTATGATCTCGCGTTGCTTCGCCTTCAACTCTCTCCTCGGAGTGCGCGCCAGAAGCCTCTTACTAGATCACAGGTCAATTTTTCACTATTTTCGTCGGCACAACTTCAATTTCAACTACAATAGTGAATTCTCCCGGCGTTCCTGGAGATCATGGCTCCGTGGGCTAACATCTAATGACGTGGTTTTGGGCTTGATTATAGCTAATGTTGGTATTTTTTTATTGTGGAGGATAGCAGATGAGAAGTTTATGATGAACAATTTTACCATCTCTTTGGACAATATTAAGAGTGGACGTTTGCACACTCTGATTACCAATGCATTTAGTCACGTAGATACCTGGCATATAGTTTCCAATATGGTTGGACTCTACTTCTTTGGATTGAATGTTGGAAGAAATTTTGGACCCGAATTTCTGCTGAAGCTGTATCTTTCAGGGGCAGTTGTTGGAGCTGTTTTTTACTTAATACACCAGGCCTTTAAAGCGCAAACATCAAAGGACTTGGCAGCTATGATTGCGACAAGGGAATTAGCATTGGGGGCAAGTGGAGCTGTGAATGCTATTATGCTACTTGACATATTTCTCTTTCCAAAAGCAACCCTCTACCTCGACTTCTTTATACCAGTTCCTGCGATCTTGCTGGGCATCTTTTTTATTGGGAGAGATATGCTCAGGATACTAGAGGGAGACAGTCGAGTATCAGGATCTGTTCATTTGGGGGGTGCTGTGGTTGCAGCCATAGCTTGGGCAGGTGTTCGGAAAGGAAGATTCTAA 990 0.4455 MQSLVRRVVVEQHPHGHAKSHSIFHTFSSILKPSQPHLHQRNHIPSSFLTHQSLHFHSCRSFSSKLRPFLSRPMISRCFAFNSLLGVRARSLLLDHRSIFHYFRRHNFNFNYNSEFSRRSWRSWLRGLTSNDVVLGLIIANVGIFLLWRIADEKFMMNNFTISLDNIKSGRLHTLITNAFSHVDTWHIVSNMVGLYFFGLNVGRNFGPEFLLKLYLSGAVVGAVFYLIHQAFKAQTSKDLAAMIATRELALGASGAVNAIMLLDIFLFPKATLYLDFFIPVPAILLGIFFIGRDMLRILEGDSRVSGSVHLGGAVVAAIAWAGVRKGRF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00845 329 SUPERFAMILY Rhomboid-like 133 326 IPR035952 -
Vian1g00845 329 PANTHER RHOMBOID PROTEASE 11 322 - -
Vian1g00845 329 FunFam RHOMBOID-like protein 12, mitochondrial 127 328 - -
Vian1g00845 329 Gene3D - 130 322 IPR035952 -
Vian1g00845 329 Pfam Rhomboid family 167 323 IPR022764 GO:0004252|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00845 - - vra:106767388 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00845 1 8781046 8790029 Vian1g00845 1 8781046 8790029 ECH