Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00827 ATGGAGGGCAAGAAGAAGAGTAAAGAAAGCAGTGCGAGCGGTCAACAGCGTGTTGGTTTACTATACGATAGTAGGATGTGCAAACACTACTCGCCGAACGAGCCGAAGCACGTCGAGAATCCTAATCGCATTAGGTCAATTTGGAATCGACTCGAAGCCGCCGGCGTTCCTCAACGATGCGTGCTTCTAGAGGCCAAGAAAGCTGAAGACAGACATGTGCGGTTAGTTCATTCCAGACATCATGTGAATCTGATTAAGAACATTAGCGCCAAGGGGTTCAAATCGCGGAGGTCTCAGCTTGCCTCCGAATTGAATTCCGTATATTTTAATGAAGGTTCATCTGAAGCTGCGTTCCTTGCTGCTGGCTCTGCTGTAGAGGTTGTTGAAAAGGTGGCAAGTGGGGAATTGGATTCAGCTGTTGCCATTGTGAGGCCCCCAGGTCATCATGCAGAACATAATGAAGCTATGGGATTTTGTCTCTTCAACAATGTGGCAGTTGCTGCAAGATATCTCTTAGACGAAAGACCTGATTTAGGTGTGAAGAAAATTTTAATTGTTGATTGGGATGTCCATCATGGAAATGGTACTCAAAAAACGTTCTGGAATGACTCTCGAGTTTTATTCTTCTCCGTTCACAGGCATGACTTTGGGGCTTTTTATCCTGCTGAGCACCACGGGTTTTATACTCAGGTGGGAGAAGGAGAAGGTGCTGGATATAATATAAATGTCCCCTGGGAGCAGGGGAAATGTGGTGATCCAGATTACATTGCAGTGTGGGACCACATCTTGCTTCCTGTTGCCAAAGAATTTAATCCAGACATAGTTATAGTTTCTGCTGGATTTGATGCAGCTGTCGGTGACCCTCTAGGAGGATGTCGTGTCACAGCAGTTGGTTATTCTGTTCTGTTGGAGAAGTTGATGAATTTTGCTAAAGGTAGGATTGTACTGATTTTAGAAGGGGGGTATTATCTTGATTCCATTGCAAAATCAATGCATGCTTGCTTGGAAGTTTTGCTAACTGGCAAGTCTGTTGCCGAATCCTCAAAGGACTATCCATTTGAGTCTACATGGAATGTGATTCAAGCGGTTCGCGAGATGTTAAGTCCATTTTGGCCTACACTTGCACCTAAACTACCACAAGAGTTAGTCTCACAAATAGGTCCCTCTCCGCATACTCTGATTTCAAGCTCGGACTCTGAAGATGAGGATGATAAGGGTGCACCAAGTTCAGGAAATCTTGGAGAACTTATTGAGGATGTCTTAAAACCACTTTCCAAACTGAAAGTGGATGCTGATGAGGAGATTCATGTTTCTAGTACTTGGCGATCTGCATTGTCAAATGTTTATATATGGTATGCCTCGTATGGATCAAATATGTGGAAAGCAAGATTTAATTGCTACCTAGAAGGTGGACAGGTGGATGGTATGGTGAAGCAGTGTTCTGGTTCAGTGAACAGAACTCTGCCAAAGGAGATCACGTGGAAGACTTTCCCTTGTGATATATTCTTTGGTCGTGATTCATCGCATTCATGGGGACTGGGAGGCGTTGCATTTCTTAATCCTGAAAAAAAGTTTGAAGGCAAGACCTACACGTGCTTGTACAAAATTTCGCTAGAGCAGTTCAATGATATTTTATTTCAGGAGAACATTTTAAGCCTTGATGCGGGCTCTCCTTTAGTTGATATAACTACCTTGAATGCTATCTCTGACAAGGAGTTCAACTCCCTGGAGGTTGTCAAGGGTGCTTGGTATGGTAATGTTGTCTACTTAGGAAAGGAGCAAGATATTCCTGTGATTACCATGACGTCTTCGCTTCTTGATATGGAACGTTTCAAATCTGGGAAGCTACCATTACGTGCCCCTAATAAAGCGTATGCCAACTCCTTAATTAAAGGGTTGGTAGAGGGAGAACAACTTTCGGAGGCGGAGGCCATTGCTTATATAGAAGGTGCTGCTAAATCGTTGTGA 1968 0.438 MEGKKKSKESSASGQQRVGLLYDSRMCKHYSPNEPKHVENPNRIRSIWNRLEAAGVPQRCVLLEAKKAEDRHVRLVHSRHHVNLIKNISAKGFKSRRSQLASELNSVYFNEGSSEAAFLAAGSAVEVVEKVASGELDSAVAIVRPPGHHAEHNEAMGFCLFNNVAVAARYLLDERPDLGVKKILIVDWDVHHGNGTQKTFWNDSRVLFFSVHRHDFGAFYPAEHHGFYTQVGEGEGAGYNINVPWEQGKCGDPDYIAVWDHILLPVAKEFNPDIVIVSAGFDAAVGDPLGGCRVTAVGYSVLLEKLMNFAKGRIVLILEGGYYLDSIAKSMHACLEVLLTGKSVAESSKDYPFESTWNVIQAVREMLSPFWPTLAPKLPQELVSQIGPSPHTLISSSDSEDEDDKGAPSSGNLGELIEDVLKPLSKLKVDADEEIHVSSTWRSALSNVYIWYASYGSNMWKARFNCYLEGGQVDGMVKQCSGSVNRTLPKEITWKTFPCDIFFGRDSSHSWGLGGVAFLNPEKKFEGKTYTCLYKISLEQFNDILFQENILSLDAGSPLVDITTLNAISDKEFNSLEVVKGAWYGNVVYLGKEQDIPVITMTSSLLDMERFKSGKLPLRAPNKAYANSLIKGLVEGEQLSEAEAIAYIEGAAKSL 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00827 655 FunFam Histone deacetylase 15 11 389 - -
Vian1g00827 655 SUPERFAMILY Arginase/deacetylase 16 371 IPR023696 -
Vian1g00827 655 PRINTS Histone deacetylase superfamily signature 145 168 IPR000286 -
Vian1g00827 655 PRINTS Histone deacetylase superfamily signature 272 282 IPR000286 -
Vian1g00827 655 Gene3D Histone deacetylase domain 11 387 IPR037138 -
Vian1g00827 655 Pfam Histone deacetylase domain 37 337 IPR023801 -
Vian1g00827 655 MobiDBLite consensus disorder prediction 393 413 - -
Vian1g00827 655 Gene3D - 442 653 - -
Vian1g00827 655 PANTHER HISTONE DEACETYLASE 9-RELATED 12 384 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00827 Vian-Chr1 8620977 8626169 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00827 K11406 - gmx:100788831 1087.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00827 1 8620977 8626169 Vian1g00827 1 8620977 8626169 ECH