Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00826 ATGGCTGCTCTAGCTCTTACACTGCTTCTTTTGGCTTTCACTGGCACTTCAAGTGCAACTTGGTGCGTTTGTAAGGATGGAGGCGACGCGATCCTGCAGAAAACATTGGACTATGCTTGTGGAGCTGGTGCTGACTGTAACCCTCTCCATCAAAACGGGCCTTGCTTCCAGCCCAACACTGTAAGGGCGCACTGCAACTACGCCGTGAATAGCTACTTCCAAAAGAAGGGTCAGGCTCAAGGGTCCTGTGAGTTTGCAGGAACAGCCACTGTTACTGCTACTGACCCCACAGGCACTGGCGGTTGTGCCTACCCTTCAAGTGTCAGTGCTGCAGGCACTGGTACAACTCCTGTCACAACTACACCAACCATGGGCACCACTCCCACCACTGGAACCCCATCAACCGGTACCGGTACCGGCACCGGCACTGGAACCACCACTGGTACTACTCCATACAGCACAACACCCGGAGTATTAGGAGGCATTGGCAGTGGCATGGGACCTTCAGGATCCGGCATGAATGATGAGAGTCACGGTGGCCTTAGACTAGTGCACTCTAGCTTCTTCTTCATCTCTCTCTTCTCTTCCTTCATGATCTTCTGCTGGGGCTGA 612 0.5359 MAALALTLLLLAFTGTSSATWCVCKDGGDAILQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCNYAVNSYFQKKGQAQGSCEFAGTATVTATDPTGTGGCAYPSSVSAAGTGTTPVTTTPTMGTTPTTGTPSTGTGTGTGTGTTTGTTPYSTTPGVLGGIGSGMGPSGSGMNDESHGGLRLVHSSFFFISLFSSFMIFCWG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00826 203 SMART X8_cls 20 104 IPR012946 -
Vian1g00826 203 MobiDBLite consensus disorder prediction 112 157 - -
Vian1g00826 203 FunFam Glucan endo-1,3-beta-glucosidase 4 15 108 - -
Vian1g00826 203 PANTHER BETA-1,3 GLUCANASE 7 125 IPR044788 -
Vian1g00826 203 Gene3D - 15 111 - -
Vian1g00826 203 Pfam X8 domain 20 90 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00826 Vian-Chr1 8613553 8616725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00826 20 106 Glycoside Hydrolase AT2G05790 49.438 1.27e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00826 - - gmx:100500078 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00826 1 8613553 8616725 Vian1g00826 1 8613553 8616725 ECH